Bacillus velezensis UCMB5036: BAM5036_3727
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Entry
BAM5036_3727 CDS
T02480
Symbol
trmF
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
baml
Bacillus velezensis UCMB5036
Brite
KEGG Orthology (KO) [BR:
baml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
baml03016
]
BAM5036_3727 (trmF)
03036 Chromosome and associated proteins [BR:
baml03036
]
BAM5036_3727 (trmF)
Transfer RNA biogenesis [BR:
baml03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BAM5036_3727 (trmF)
Prokaryotic type
BAM5036_3727 (trmF)
Chromosome and associated proteins [BR:
baml03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
BAM5036_3727 (trmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_binding_2
Pyr_redox_2
FAD_oxidored
DAO
HI0933_like
Pyr_redox_3
AlaDh_PNT_C
Thi4
Motif
Other DBs
NCBI-ProteinID:
CCP23728
LinkDB
All DBs
Position
complement(3904328..3906214)
Genome browser
AA seq
628 aa
AA seq
DB search
MGYEAGQYDVIVIGAGHAGVEAALASARQGAKTLVLTINLDMVAFMPCNPSVGGPAKGIV
VREIDALGGEMARNIDKTHIQMRMLNTGKGPAVRALRAQADKFQYQHEMKHTLEKTPNLT
LLQGIAERLIIEDGECRGVITQTGAEYKAKTVVLTTGTYLRGRIILGDLSYSSGPNNQQP
SIKLSEHLEELGFDLVRFKTGTPPRVSSDSIDYSKTEIQPGDPVPRAFSYETVEYITDQL
PCWLTYTSPETHEIIDSNLHRSPMYSGMIKGTGPRYCPSIEDKVVRFNDKPRHQIFLEPE
GRNTQEVYVQGLSTSLPEDVQQRMLATIPGLEKVQMMRAGYAIEYDAIVPTQLWPTLETK
KIPNLYTAGQINGTSGYEEAAGQGIMAGINAGRKALGKEEVILSRSDAYIGVLIDDLVTK
GTNEPYRLLTSRAEYRLLLRHDNADLRLTEIGHDIGLISDERYEAFEKKKAAIEAEKKRL
WSVIIKPSPENQEYIRSLGGSELKDGVRGTDLMKRPEMNYETVTKLAPADSPVPQDVAEQ
VEIQVKYEGYIEKSLQQVEKLKKMENKKIPDRIDYDAIKGIATEARQKLKEVRPLSVAQA
SRISGVNPADISILLVYLEQGRIAKVAE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggggtatgaagcaggccaatacgacgtgattgtcatcggcgccgggcatgccggtgtt
gaggctgccctcgcatccgcgcgccagggagccaaaacgcttgttttgacgatcaatctt
gatatggttgcgtttatgccatgtaatccgtctgtcggcggccccgcgaaagggattgtc
gtccgcgaaattgacgcgctcggcggagaaatggctagaaatatagataaaactcatatt
caaatgagaatgctgaatacaggaaaaggtccggccgtacgggcgctgcgtgcgcaggcg
gataaattccaatatcagcacgaaatgaagcatacgctggaaaaaacaccgaatttgaca
cttcttcaagggattgccgagcgtttaatcattgaagacggggagtgccgcggtgtcatt
acgcaaaccggtgctgaatataaggcaaaaacggtcgtgctgacaaccggaacgtattta
agagggcggatcattctcggtgatctgtcttactcaagcggtccgaataaccagcagccg
tctattaaactttctgagcacttagaggagctcggttttgatctcgtccgttttaaaacg
ggcacgcctcctcgtgtctcaagcgattccattgattacagcaaaacagaaatccagccg
ggggacccggttccgcgcgctttctcatatgaaacggttgaatacattaccgatcagctg
ccttgctggctgacttacacgagtcctgagactcatgagatcatcgacagcaacctgcat
cgttcaccaatgtattccggtatgattaaaggaacgggaccgagatactgcccttcgatt
gaagataaagtcgttcggtttaatgataaaccgcgtcatcagattttccttgagccggaa
ggcagaaatacgcaggaagtatacgttcaaggtttatccacgagtcttcctgaggacgtg
cagcagcggatgctggcgaccattccgggactggaaaaggtgcagatgatgagagccgga
tacgcgattgagtatgacgcgattgtaccgacgcagctctggcctacactggagacgaaa
aaaatccctaacctgtacacggccggtcaaattaacggtacatcaggttatgaggaagca
gccgggcaaggaattatggcagggatcaacgcaggccgcaaagcgcttggaaaagaagaa
gtgatcctcagccgttccgatgcttatatcggtgtattgattgatgatttggtaacgaaa
ggaaccaatgaaccgtaccgtctgctgacttcacgggcggaatacagactgctgctccgt
cacgacaacgcggatcttcgtctgacggaaatcggccacgatatcggcttaatttctgat
gagcgctatgaagcgtttgagaagaaaaaagcggcgatcgaggcggagaaaaaacgtctc
tggtctgttattatcaagccgtctcctgagaatcaggaatatatccgttcactcggcgga
agcgagctgaaagacggagtgcgcggcacagatttaatgaaacgtccggaaatgaactat
gaaacagtgacaaaacttgcgcctgcagattctccggttccgcaagatgtggcggaacaa
gtggaaattcaggtgaaatatgaaggatatatcgaaaaatccttgcagcaagtggaaaag
ctgaagaaaatggaaaacaaaaaaatccctgatcggattgattatgacgccattaaagga
attgctactgaagcccgtcaaaagctgaaagaagtgcgtcctttatcagttgctcaagcg
tcccgtatttccggcgtcaatccggcagacatttcaatcttgctggtatacctggagcag
ggccgtattgccaaggtagctgaatag
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