Bacillus velezensis UCMB5113: BASU_0915
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Entry
BASU_0915 CDS
T02796
Symbol
sigM
Name
(GenBank) RNA polymerase ECF (extracytoplasmic function)-type sigma factor (sigma(M))
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bamn
Bacillus velezensis UCMB5113
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamn03021
]
BASU_0915 (sigM)
Transcription machinery [BR:
bamn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BASU_0915 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
DUF134
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
CDG25214
LinkDB
All DBs
Position
complement(942617..943108)
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AA seq
163 aa
AA seq
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MTIDEIYQMYMNDVYRFLLSMTKDKHLAEDLLQETFMRAYIHIHSYDHSKVKPWLFQVAR
NAFIDYVRKHKKEVTISDDLIGSLFQTAVQSPAHQIEIKEVLTGYMSELPDNYREALTLY
YLKELNYKEASHIMNISEANFKSVLFRARQRLKALYNRGVNDE
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatcgatgaaatttaccaaatgtatatgaatgatgtttaccggttcctgctctcc
atgacaaaagacaagcatctcgctgaagatttgctgcaggaaacctttatgagggcatac
atacacattcactcctacgaccacagcaaagtaaagccatggctttttcaagtggcgaga
aatgcgtttatagattatgtcagaaaacataaaaaggaagtgaccatttccgatgactta
attgggagcctttttcagacggctgttcaaagcccggctcatcagattgaaatcaaggaa
gtgctgacagggtatatgtccgaacttcccgacaattatcgggaggccttaacactgtat
tatttaaaagaactgaattacaaagaagcatcccatattatgaatatttcagaggctaat
tttaaaagtgttttatttcgtgccagacagcggctgaaagcactttataatagaggtgtt
aatgatgaatga
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