Bacillus velezensis UCMB5113: BASU_1598
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Entry
BASU_1598 CDS
T02796
Symbol
polC
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn03030
DNA replication
bamn03430
Mismatch repair
bamn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BASU_1598 (polC)
03430 Mismatch repair
BASU_1598 (polC)
03440 Homologous recombination
BASU_1598 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamn03032
]
BASU_1598 (polC)
03400 DNA repair and recombination proteins [BR:
bamn03400
]
BASU_1598 (polC)
Enzymes [BR:
bamn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BASU_1598 (polC)
DNA replication proteins [BR:
bamn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BASU_1598 (polC)
DNA repair and recombination proteins [BR:
bamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BASU_1598 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CDG25892
LinkDB
All DBs
Position
1643623..1647936
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQLNMTDDTFMTYFEDGEIDKLTIHKAEKAWHFQFRFKALLPYQI
YDSFMMRLTQSFAHIARVTSSVQVIDPTVTEELVQDYWTRCIEELEGTSPPMVALLNQQK
PKLKGNKLIVKTKTDTEASALKNKYFALIQHSYRQFGFPELQLDTEIFVSDQEVQKFREQ
KLAEDQERAMQALIEMEKKEKEGDEDQAPSGPLVIGYQIKENEEIRTLDSIMDEERRITV
QGFVFDAETRELKSGRTLCIFKITDYTNSILVKMFAREKEDAALMKTLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDTAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANIVDDGVPIAYNPAHRLLEEDT
YVVFDVETTGLSAVYDTIIELAAVKIRGGEIIDKFEAFANPHHPLSATTIELTGITDDMV
RDAPDVVDVVRDFKEWIGDDVLVAHNASFDMGFLNVAYKRLLKTEKAKNPVIDTLELARF
LYPEFKNHRLNTLCKKFDIELTQHHRAVFDAEATGYLLLKMLKDAAEKDIFYHDQLNENM
GQSNAYQRSRPYHATLLAVNETGLKNLFKLVSISHIQYFYRVPRIPRSQLNKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLQLELVRDEKALKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGAEKAKEIVVDNTQKVASMIDEIKPIKDDLYTPKIDGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLAPHYVCPSCRYSEFFNDGSVGSGFDLPDKSCPSCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPHAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDHNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNTCELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKKNNVPNWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMDD
ISSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSASEFIIDGNSLIPPFNSIP
GLGTNAALNIVKARKEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaagacagtttcagattcttctgcagcagcttaatatg
acagatgataccttcatgacatactttgaagacggagagattgataaactgacaatccat
aaagcagaaaaagcctggcatttccaatttcgctttaaggctcttctgccgtatcaaata
tatgattcattcatgatgaggttaacacaatcgtttgctcacatcgcccgtgtcacatcg
tctgttcaggtcatcgaccctacagtgacagaggagcttgtacaggattattggacacgc
tgtattgaagagcttgaaggaacctcgccgccgatggtggctcttttgaatcagcagaag
ccgaagctcaaaggaaacaaactgatcgtgaaaacaaaaacagatacagaagcatctgcg
cttaaaaacaaatacttcgcgctgattcagcacagctatcgccaattcggctttccggaa
ctgcagctggataccgaaattttcgtatctgaccaagaagtccagaaattccgcgagcaa
aagcttgctgaagatcaggagcgggcgatgcaggcgcttatcgagatggagaagaaggaa
aaagagggcgatgaggatcaggcaccgtccggaccgcttgtcatcggctatcaaattaaa
gagaacgaagaaatccggacgcttgacagcatcatggatgaagaaagaagaattacggtg
caggggtttgtgtttgatgctgaaacacgcgagctgaaaagcggacgcacgctctgcatt
ttcaaaatcacggactatacaaacagcattttagtaaaaatgttcgccagagaaaaagaa
gacgccgctttgatgaaaacgctgaaaaaaggcatgtgggtaaaggcgcggggaagcatt
caaaacgatacattcgtcagagacctcgtcatgattgcaaatgacgtgaatgaaataaaa
gccaaaacccgtgaagacaccgctcctgaaggcgaaaaacgggttgagcttcatctgcat
tctccgatgagccaaatggatgctgtaacgggcatcggaaagcttgtcgaacaggcgaaa
aaatggggacatgaagcgattgcgttaactgatcatgccgttgtgcagtctttcccggat
gcttattccgccgcgaaaaaacacggcattaaaatgatttacggaatggaagccaatatc
gtagatgacggcgttccgatcgcatacaatccagctcaccgtctcctggaagaagacaca
tacgttgtctttgacgttgaaacgacaggtctgtccgcagtgtatgacaccatcattgag
cttgccgcagtcaaaataagaggcggagaaatcatcgataaattcgaagcgttcgccaat
ccgcaccatccgctgtcagcaacgacgatagagcttaccgggattactgacgacatggtc
cgcgacgctcccgatgtcgttgatgtcgtccgggattttaaagaatggatcggcgatgac
gtgcttgtggctcataacgccagctttgatatgggatttttaaatgtagcgtacaagcgt
cttttgaaaacggaaaaagcgaaaaatccggtcattgatacgctggaactcgcgcgtttc
ctgtatcctgagtttaaaaatcaccgcttaaatacgttatgtaagaagtttgatatcgaa
ttaacccagcatcaccgagcggtttttgacgctgaagcaacgggctacctgctgttgaaa
atgctcaaagatgccgctgaaaaagacattttttatcatgatcagctgaatgagaatatg
ggacaatccaatgcttatcagagatcaaggccttatcacgctacattgcttgccgtaaat
gagaccggccttaaaaatctgtttaagctcgtgtccatttctcatattcaatatttctac
cgagtgccgcgcattccgaggtcgcagcttaataaatacagagaaggtctgttaatcggc
tctgcctgtgacaggggtgaggtctttgaaggcatgatgcaaaaatctcctgaagaggtt
gaagatatcgcatccttctatgattatcttgaagtgcagccgccggaagtatacagacac
cttctgcagcttgagctcgtccgggatgaaaaagcgctgaaagaaatcatcgccaacatt
acgaagctcggagaaaaattgaataagccggtcgtggctacgggaaatgtccactattta
aacgatgaggataaaatttaccggaagatcttaatatcttcccaaggcggcgccaacccg
ttaaacagacacgaactgcctaaagtgcacttcagaacgacagatgaaatgctggaggct
ttctccttcctcggtgcggaaaaagcgaaagaaatcgtggttgacaatacgcagaaagtc
gcttcgatgatcgatgagatcaaaccgatcaaagacgatctgtacacgccgaaaattgac
ggagccgatgaagagatccgtgaaatgagctatcagcgcgccagaagcatttacggtgaa
gagcttcccgaaattgtggaagcgagaatagaaaaagaattaaaaagtatcatcggtcat
ggattcgccgttatttatctcatctctcataagcttgtaaaacggtctctggatgacggt
tatctcgtcggctcccgggggtccgtcggttcatcgcttgtggcgaccttaacggaaatt
actgaagtgaacccgctcgctccgcactacgtgtgcccgagctgccgatattccgaattc
tttaatgacggatcagtcggttccggttttgaccttccggataaaagctgcccgtcttgc
ggcacccctttgaaaaaggacggacatgatatcccgtttgaaacgttcttaggctttaaa
ggtgacaaagtacccgatatcgatttgaacttctcaggtgagtatcagccgcatgcccat
aactacacgaaagtattgttcggtgaagataacgtgtatcgcgcgggaacgatcggcacc
gtcgcggaaaagacggcttacggatatgtgaaaggctatgcgggcgatcacaacctacac
atgcgcggcgcggagatcgaccgtctggtgcaaggctgcaccggcgttaagagaacgacc
ggccagcacccgggggggattatcgttgtcccggattacatggatatttacgatttttca
ccgatacaattcccggcagatgcgacggggtctgaatggaaaacgactcattttgacttc
cactccattcatgacaacctgctgaagcttgatatattagggcacgatgatccgaccgtc
atccggatgctccaggatttaagcggaattgatccgaagacaattccgacagatgatccg
gaagttatgaagattttccaaggcacagaatcgctcggcgttactgaagagcagatcggc
tgtaaaacggggacgctcggcattcctgaattcgggacgcgatttgtgcggcagatgctt
gaggatacgaagccgacgacgttctccgagcttgtccagatttccgggctttctcacgga
acggacgtatggctcggcaatgcgcaggaactgatacacaacaatacgtgtgaactgagc
gaagtgatcggctgccgtgatgacattatggtttacttgatctatcagggccttgagcct
tcactggcctttaaaatcatggaattcgtccgtaaaggcaaaggcctgacgccggaatgg
gaagaagaaatgaaaaagaacaatgtgccgaactggtatattgattcatgcaaaaaaatc
aaatacatgttcccgaaagcccacgccgccgcatacgtgctgatggcggtgcggattgca
tactttaaagtgcatcacgcgcttttatattatgctgcgtattttaccgtccgcgcagat
gactttgacattgatacaatgattaaaggctcgactgccatcagagcggtgatggatgat
atcagctctaaagggcttgatgcttcgccgaaggagaaaaacctccttaccgtgttagag
cttgcgcttgaaatgtgtgagcgcggctattccttccagaaggtcgatctataccgttcg
agcgcttcggaatttatcattgacggcaacagtctcatcccgccgttcaactcaattccg
ggactcggaaccaacgccgctctcaatattgtgaaagcgcggaaggaaggggagttcctt
tcaaaagaggatcttcaaaaacgcggaaaagtgtcaaaaaccattttagagtatttagac
cgtcacggctgtcttgagtcgcttccggaccaaaatcagctgtctctgttttaa
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integrated database retrieval system
