Bacillus velezensis SQR9: V529_34990
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Entry
V529_34990 CDS
T03384
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bamy
Bacillus velezensis SQR9
Pathway
bamy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V529_34990 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_34990 (uvrB)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V529_34990 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V529_34990 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
AAA_7
AAA
AAA_22
AAA_25
AAA_30
AAA_16
CDT1
P-loop_SecA
AAA_19
AAA_5
TrwB_AAD_bind
UB2H
AAA_6
EAD4
Motif
Other DBs
NCBI-ProteinID:
AHZ17525
LinkDB
All DBs
Position
complement(3549958..3551943)
Genome browser
AA seq
661 aa
AA seq
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MKDRFELVSKYQPQGDQPQAIEKLVKGIQEGRKHQTLLGATGTGKTFTVSNLIKEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYREMVVSLRPEMEIERNELLRKLVDIQ
YARNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAILNIEQELEERLKVMHENGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQV
LVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYEIEHTPEMIEQIIRPTGLLDP
LIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKHDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNAEGRVIMYADKITNSMEIAINETKRRREQQERFNEIHGITPQTINKEIRDVIRATQ
AAEDKEEYKTKAAPKLAKMTKKERQKVVEQMEHEMKEAARALDFERAAELRDLLLELKAE
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatcgttttgagttagtctcgaaatatcagccccagggagatcagccgcaagcg
attgagaagcttgtcaaaggcatacaggaaggcagaaaacaccagactctcctgggtgcg
acagggacgggcaaaacctttaccgtgtccaatctgattaaagaagtgaataaaccgaca
ctggtcattgcccataacaaaacccttgccggacagctgtacagcgagtttaaggagttt
ttcccgaacaacgctgtcgaatattttgtcagctattacgattactatcagccggaggcg
tacgtgcctcaaacggatacttttatagagaaagacgcaagcattaatgatgaaattgat
aaactgagacactccgcgacatcctctctgtttgaacggagagatgtcattattattgcg
agtgtgtcatgtatatacggtctcggttcgcctgaagaataccgggaaatggttgtgtcg
ctcagaccggaaatggaaattgagcggaacgagctgctgagaaagcttgtggatatccag
tatgcccgcaatgatatcgactttcagcgcgggacgttccgcgtgcgcggagacgttgtg
gaaatctttccggcttcccgtgatgaacattgtatcagagtggaatttttcggagatgaa
attgagcggatcagagaggtcgacgctttgaccggagaaattctcggcgaccgtgaccat
gtcgcaattttcccggcttcccacttcgtcacccgggcggaaaagatggaaaaagcgatt
ctgaatattgaacaggagcttgaggagcgcttgaaagtgatgcacgaaaacggcaagctc
cttgaagcgcagcggcttgagcagcggacgagatatgatcttgaaatgatgcgggaaatg
ggtttttgctcagggatcgagaactattcaagacatttgacactccgtccgccgggctct
acgccgtatacgctgcttgattattttccggacgattttatgattgtcgttgatgaatca
catgtgacgattccgcaggtgcgcggcatgttcaacggtgaccaggcgagaaaacaggtg
cttgtcgatcacgggttccgcctgccgtcagcgcttgacaaccgtccgctccgattcgag
gaatttgagaaacacatgcacaatatcgtgtacgtgtcggcgactccgggaccgtatgaa
attgagcatacgccggaaatgatcgagcagatcatcagaccgactggactcctcgatccc
ctcattgacgtccggccgatcgaaggacagattgatgatctgatcggcgagattcaggcg
aggatagaacggaatgagcgcgttcttgtgacgactttaacgaaaaaaatgtcagaggat
ctgaccgattatctcaaggaaatcggcatcaaggtcaattatctgcattccgagattaag
acgcttgaacggattgaaatcatccgtgacctccgcctcggaaaacatgatgtgttaatc
ggcatcaacctgctgagggaagggcttgatattccggaagtgtcacttgtcgccattctc
gatgcggataaagaaggcttcctccgttccgaacgttcgctgattcagacgatcggacgg
gcggcacgaaacgcggaaggccgcgtcatcatgtatgccgataaaatcacgaattcgatg
gaaatcgcgattaatgaaacgaagcgccgccgggaacagcaggagcgctttaacgaaatt
cacggcattacgccgcaaacgatcaataaggaaatccgcgatgtgatccgcgcgacgcag
gccgctgaggataaagaagaatataaaacaaaagccgcgcctaaactggcgaagatgacg
aagaaagaacgccagaaagtcgttgagcaaatggagcacgaaatgaaagaagcggccaga
gcgcttgatttcgagcgggcggcagagcttcgtgatttactgttagagcttaaagcggaa
ggatga
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