Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00031
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Entry
BUMPUSDA_CDS00031 CDS
T03022
Symbol
orn
Name
(GenBank) Orn
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bapu
Buchnera aphidicola USDA (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bapu03019
]
BUMPUSDA_CDS00031 (orn)
03009 Ribosome biogenesis [BR:
bapu03009
]
BUMPUSDA_CDS00031 (orn)
Messenger RNA biogenesis [BR:
bapu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BUMPUSDA_CDS00031 (orn)
Ribosome biogenesis [BR:
bapu03009
]
Eukaryotic type
Pre-60S particles
RNases
BUMPUSDA_CDS00031 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHG59832
UniProt:
W0P311
LinkDB
All DBs
Position
612256..612804
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AA seq
182 aa
AA seq
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MKFNKKNLIWIDLEMTGLNPNIHRIIEIATLITDTDLNIISEGPIIPIHQTKKNISIMNA
WNTMIHTNNGLIKRVEKSSYNEHQAEIETILFLKKWVPIQSSPICGNSVGQDRRFLFQYM
PTLENYFHYRCIDVSTIKELAIRWNPKIYHKLKKNSKHSALEDIYESIMELNFYRKNFLK
FQ
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaataaaaaaaatctaatctggattgatttagaaatgactggacttaatcca
aatatacatcgtattattgaaattgccacattgattacagacactgatttaaatataatt
tcagaaggtccaataattcctatacatcaaacaaaaaaaaacatttcaataatgaatgcg
tggaacactatgattcatacaaataacgggttaattaaacgagtagaaaagagttcatat
aatgagcatcaagcagaaattgaaacaatactttttttaaaaaaatgggtccctattcaa
tcatcaccaatttgtggtaatagtgttggtcaagatcgaagatttttatttcaatatatg
cccacactagaaaattattttcattatagatgtatagacgttagtacgattaaagaatta
gctatccgttggaatcctaaaatctatcataaattaaaaaaaaatagcaaacatagtgca
ctagaagatatttatgaatctataatggaactaaatttttatagaaaaaattttcttaaa
tttcaataa
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