Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00144
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Entry
BUMPUSDA_CDS00144 CDS
T03022
Symbol
recd
Name
(GenBank) Recd
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bapu
Buchnera aphidicola USDA (Myzus persicae)
Pathway
bapu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bapu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BUMPUSDA_CDS00144 (recd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapu03400
]
BUMPUSDA_CDS00144 (recd)
Enzymes [BR:
bapu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BUMPUSDA_CDS00144 (recd)
DNA repair and recombination proteins [BR:
bapu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BUMPUSDA_CDS00144 (recd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
Viral_helicase1
UvrD_C_2
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
PhoH
RsgA_GTPase
ABC_tran
CbiA
DEAD
SMC_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AHG59941
UniProt:
W0NZM0
LinkDB
All DBs
Position
503588..505417
Genome browser
AA seq
609 aa
AA seq
DB search
MTSLLKKAVIMKIIRPIDFYFSQFISKKNTILMLVAACVSYENKNGHIFLPIEYFEKNHF
FSTTNTKFIQKILNILEKKINWLEELLQHNSVSNGSDSTPLVLFKKKIYLYKMWKSEINI
LKFLNEKNKNKKVNNKKFSKILDNLFPEKFKNTQKIAVALTLIKNITFIIGGPGTGKTTT
ILKIIIALIKTAKKSIKIQLSAPTGKATTRLNEIIENNIFDIYLSQKEKTYLPCSAITIH
QLLGFQKISQKSFFNKNNRLNLDVLIIDETSMIDILMIEKIFDAVSKNTKLIFIGDHNQL
CPIDAGSILKSIARYSNNGYNYKTLLNLEKLTNYKIANKINENKINSINNNICILKKNYR
FKKNSGIYILSNAISNKKINIFEELFNNSIQNVFFYEINSMENYQKMIENISLNYKKFWE
KIYKKEKIQNIIETFQYHQVLCVLRDGIFGANILNKKIEEEMYKKDMIKYFYINNKIWYV
GKPIMINSNNQLLDVFNGNIGITNMSNKGVLQVSFLKEKNIINIPINILRNYETAWVITV
HKAQGSEFMNTSLILPNVDSNILNKDVLYTGITRSRNILNIFSNKKIFIKTALKNIKKNN
FIEMNNFLE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacttttaaaaaaagctgtgatcatgaaaattattcgtcctattgatttttat
ttttcacaatttatatcaaaaaaaaacactattttaatgttagttgcagcatgtgtgagc
tatgaaaataaaaatggtcatatttttttaccaatagaatattttgaaaaaaatcatttt
ttttctactacaaatacaaaatttatacaaaaaattttaaatatattagaaaaaaaaata
aattggttagaagaattattacaacacaactctgttagtaacggttctgattctacacct
ttagtattatttaaaaaaaaaatatatctttataaaatgtggaaatctgaaataaacatt
ttaaaatttttaaatgaaaaaaataaaaataaaaaagtgaataataaaaaattttctaaa
atattagataatttattccctgaaaaatttaaaaacactcaaaaaatagcggtagcacta
actttaataaaaaatataacttttattattggcggacctggaactggaaaaactactact
atattaaaaataattattgctctaataaaaacagcaaagaaatcaataaaaattcaatta
tctgctcctactggaaaagcaacaacacgtttaaacgaaattatagaaaataatattttt
gatatttatctttctcaaaaagaaaaaacttatcttccatgctctgctataacaatacat
caattattaggatttcaaaaaatatcacaaaaaagttttttcaataaaaacaatcgatta
aatttagacgtattaattattgatgaaacttcaatgatagatattttaatgatagaaaaa
atatttgatgcagtatctaaaaatactaaattaatttttataggagatcataatcaatta
tgtccaatagatgcaggttctattttaaaaagtattgctcgttactctaataacggatac
aactataaaactttattaaatctagaaaaactgacaaactataaaatagcaaataaaata
aatgaaaataaaatcaactctattaataataatatttgtatattaaaaaaaaattataga
tttaaaaaaaattcaggaatttatattttatcaaatgcaatatctaataaaaaaataaat
atttttgaagaactatttaataatagcattcaaaacgtttttttttatgaaataaattct
atggaaaattatcaaaaaatgattgagaatatttctttaaattataaaaagttttgggaa
aaaatatataaaaaagaaaaaattcaaaacatcatagaaacttttcaatatcatcaagta
ttatgtgtattacgcgatggtatcttcggtgcaaatatattaaataaaaaaatagaagaa
gaaatgtataaaaaagacatgatcaaatatttttatattaataataaaatatggtatgta
ggaaaacctattatgattaattctaataatcaacttctagatgtatttaatggcaatata
ggtattactaatatgagtaataagggtgtcttacaagtatcttttttaaaagaaaaaaat
attataaatattcctataaatatcttaagaaattatgaaacagcttgggttattactgta
cataaagcacaaggttctgaatttatgaatacgtctttaatattacctaatgttgattca
aatattttaaataaagatgttttatatactggtatcacaagatctcgaaatatattaaat
attttttcaaacaaaaaaatttttataaaaacagctttgaaaaatataaaaaagaataat
tttatagaaatgaacaactttttagaataa
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