Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00196
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Entry
BUMPUSDA_CDS00196 CDS
T03022
Symbol
rlud
Name
(GenBank) Rlud
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bapu
Buchnera aphidicola USDA (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bapu03009
]
BUMPUSDA_CDS00196 (rlud)
Enzymes [BR:
bapu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BUMPUSDA_CDS00196 (rlud)
Ribosome biogenesis [BR:
bapu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BUMPUSDA_CDS00196 (rlud)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AHG59988
UniProt:
W0P4H9
LinkDB
All DBs
Position
complement(439782..440729)
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AA seq
315 aa
AA seq
DB search
MKKIELSTIVSSIALSGKRLDQVLTHLFKQYSRSYLKQLILKNKVFVDKNIINQPDKKIF
GGEIISIYPDSKELFLHLAENISLNIIYEDCDIIIINKPAGLVVHPGAGNHKGTILNALL
YRYQNIQHLPRAGIVHRLDKDTSGLMVIAKNLISYNYLLKLLKKRKITRKYQGIVKGNMI
SGGTINAPIIRHNVKRTCMMVHSLGKKSITHYKIINRFRFHTHITIRLETGRTHQIRVHM
LHIRHPLVGDPIYGGMNQKIDNIKNKNINKIVQFPRQALHATHISFHHPITKNLMSWSVP
LPEDIKELLTYITNI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaatagaattaagtacgattgtatcttctattgctttatcaggaaaaagatta
gatcaagtattaactcatttgttcaagcaatattctcgttcttatttaaaacagttaatt
cttaaaaataaagtatttgttgataaaaatataattaatcagcctgataaaaaaatattc
ggaggagaaattattagtatttatcccgattcgaaagaactttttcttcatttagctgaa
aatatttctttaaatattatttacgaagattgtgacataattattattaataaacctgct
ggtttagtcgttcatcctggtgcggggaatcataaaggaactattttaaatgcattatta
tatcgttatcaaaatattcagcatttgcctcgtgcaggcattgtacatcgtttagataaa
gataccagtggcttaatggtaattgcaaaaaatttgatatcttataattatttgttaaaa
ttattgaaaaaaagaaagattactcgaaaatatcaaggcatcgtaaaaggaaatatgatt
tcaggtggtactatcaatgctcccataatacgtcataatgttaaaagaacatgtatgatg
gtacatagtttaggtaaaaaatctattactcattataaaataataaatcgttttagattt
catacgcatataacgataagattagaaacaggacgtacacatcagattcgtgtacacatg
ttacatattagacatccgttagttggcgatcctatttatggtggaatgaaccagaagatt
gataatataaaaaataaaaatataaataaaatagttcaatttccgcgtcaggcattacat
gctactcatatttcttttcatcatcctattactaaaaacttaatgtcttggtcagtacct
cttcctgaagatataaaagaacttctaacatatattacaaatatataa
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