Beijerinckiaceae bacterium RH AL1: RHAL1_04114
Help
Entry
RHAL1_04114 CDS
T06029
Name
(GenBank) Double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bbar
Beijerinckiaceae bacterium RH AL1
Brite
KEGG Orthology (KO) [BR:
bbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbar03400
]
RHAL1_04114
Enzymes [BR:
bbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHAL1_04114
DNA repair and recombination proteins [BR:
bbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RHAL1_04114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF6763
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VVC57175
UniProt:
A0A5E4P3R8
LinkDB
All DBs
Position
1:complement(4145563..4148961)
Genome browser
AA seq
1132 aa
AA seq
DB search
MTALVVPPHLTARQHLASDPKSSIWVSANAGSGKTHVLTQRVMRLLLMGVPPSKILCLTF
TKAAAAEMSARVFRELSKWTALDDGPLREKIIETGAPAPDAKDLVLARRLFTRTVETPGG
LKIQTIHAFCERLLHLFPFEANVPAHFEVADDKRTEEMLSLARYAAIADAQRRGGPQAEA
LATLAEAAGSLGLDPVLGVAMRLRKAAKRVEPDPQHKLAAALGAGNLVSVDDVHRVMIEG
IATARWREIAAYLATGSRSDVARAAELEELFAALRNEAKGADLVPRLLAIFFTQKGDRRG
SLMTRALATKRPDILADLEDEQTRLLALREQLKVAEAIDRTQALVTIVDAIIDRYDAAKG
AAGLLDFDDLIDRTRGLLERSDAGWVLHKLDAGIDHVLVDEAQDTSEAQWRILEKLTDDF
AAGAGARQTSRSFFVVGDEKQSIFSFQGAAPLMFDGMRSRFERRFKQGGEPFARVALNAS
FRSTPGILAAVDEMFEPAPHRDGLVAAADDWTPHESLKPTLPSLVEIWPPIGATATTDPE
DWKIPLDLEAEDDPVSKLADRVARKIKALTAPASGEHVHDARTGLRREISAGDILVLVRT
RNAFFEAVIRALKAHGVPVAGADRLDVANHIAVMDLVAAGRAALLPDDDLSLACALKSPL
FGFTDDDLLALAPNRKGPLVAALAASGDPRHKAAHEAMTRWAARAAGASPFAFYVELLGR
DGGRLKMEARLGPEAHDAIDEFLRLALEHEATGAPSLTSFLADVEALDSSIKRDMEGQGG
TVRVMTVHAAKGLEAKIVFLPDTCAVPTARLDPPVFDLAAEGAPPLIAWSPRSGDDPAPI
AEARKRQREASMREYRRLLYVAMTRAEERLYLAAFYNIHKPPEDCWSAMAETVFGEAETV
AAFWDEAEVVRRIHRPGAPATGAAPRAQHEQGRFPTPPPWLGQPVAPPASPKPPQRATRV
AAAPSPERRRALAYGEALHLLLQALPAHPPGEREAAAHALLAAQPGLAPEPERAGLIAEA
LAVMALPELAPLFGPGARAEVPVLGRTTRADGSEVEVSGKVDRLVVTPDAVLIADFKSGP
AHAVVPPDYRRQMQLYHSVLAPLWPERPLRLLLVWTSVPRVVDLTAEPPAAS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccctcgtcgtccccccgcacctcactgcgcgccagcacttggcctccgatccg
aagagctcgatctgggtctcggccaatgccggctccggcaagacccacgtgctgacgcag
cgggtgatgcgccttctgctgatgggcgtgccgccctcgaagatcctgtgcctgaccttc
accaaggcggcagcggccgagatgagcgcgcgcgtcttccgcgagctgtcgaaatggacc
gccctcgacgacggcccgctgcgcgagaagatcatcgagacgggcgcaccggcccccgac
gccaaggacctcgtgctggcgcgacgtctcttcacgcgcaccgtggagaccccgggcggc
ctgaagatccagacgatccacgccttctgcgagcggctgctgcacctcttccccttcgag
gccaacgtgccggcgcatttcgaggtggcggacgacaagcgcaccgaggagatgctgtcg
ctcgcccgatacgcggcgatcgccgatgcgcaacggcggggcggtcctcaggcggaggcg
ctggccacgcttgccgaagcggccgggtcgctcggcctcgaccccgtgctcggcgtggcg
atgcgtctgcgcaaggcggcgaagcgcgtcgagcccgacccgcaacacaagctcgccgcg
gcgctcggcgccggcaacctggtgagcgtcgacgacgtccaccgcgtgatgatcgagggc
atcgcaacggcgcggtggcgcgagatcgcggcatatctggcgaccggctcgaggagcgac
gtcgcgcgggccgccgagctcgaggagctgttcgccgcgctccgcaacgaggcgaagggc
gccgatctcgtgccgcgccttctcgccatcttcttcacgcagaagggcgacaggcgcggc
tcgctcatgacgagggcgctcgccaccaagcgccccgacatccttgccgatctggaagac
gagcagacgcgcctcctcgcgctgcgcgagcagctgaaggtcgccgaggccatcgatcgc
acgcaggcgctcgtcaccatcgtcgacgccatcatcgaccgctacgacgcggccaagggc
gcggccggcctgctcgacttcgacgacctcatcgatcgcacccgcgggctgctcgagcgc
tccgacgccggctgggtgctgcacaagctcgacgccggcatcgaccacgtgctcgtcgac
gaagcgcaggacacgagcgaggcgcaatggcgcatcctcgagaagctcaccgacgatttc
gccgctggcgcgggcgcgcgccagacgtcgcgcagcttcttcgtcgtcggcgacgagaag
cagtcgatcttctcgttccagggcgcagcgccgctgatgttcgacggcatgcggtcgcgg
ttcgagcgccgcttcaagcagggcggcgagccgttcgcgcgcgtcgcgctcaacgcctcg
ttccgctcgacgcccggcatccttgccgccgtcgacgagatgttcgagccggcccctcat
cgcgacggcctcgttgccgcggcggacgactggacgccgcacgagagcctgaagccgacg
ctgccgagcctcgtcgagatctggccgccgatcggcgcgaccgcgacgaccgatcccgag
gactggaagataccgctcgacctcgaggccgaggacgacccggtgagcaagctggccgat
cgcgtcgcgcgcaagatcaaggcgctgacggcgccggcgtcgggagagcacgtgcacgac
gcgcgcaccggcctgcggcgcgagatctcggccggcgacatcctcgtgctggtgcgcacg
cgcaacgccttcttcgaggcggtgatccgtgcgctgaaggcgcacggtgtccccgtggcc
ggtgccgatcggctcgacgtcgccaaccacatcgcggtgatggacctcgtcgcggcgggt
cgcgcggcgctgctgccggacgacgacctgtcgctcgcctgcgcgctgaagtcgccgctc
ttcggcttcacggacgacgacctgctggcgctggcgccgaaccgaaaaggtccgctcgtc
gcggcgctcgcggcctccggcgaccctcgccacaaggcggcgcacgaggccatgacgcgc
tgggccgcgcgggccgcaggcgcctcgccgttcgccttctacgtcgagctgctggggcgc
gacggcggtcgcctcaagatggaagcgcgtctcgggccggaggcgcacgacgcgatcgac
gagttcctgcgcctcgcgctcgagcacgaggcgaccggcgcgccgtcgctgacgagcttc
ctcgccgacgtcgaggcgctcgactcctcgatcaagcgcgacatggaaggccagggcggc
accgtgcgcgtgatgacggtgcacgccgccaagggcctcgaggcgaagatcgtcttcctg
cccgacacttgcgcggtgccgaccgcgcggctcgacccgccggtcttcgacctcgccgcc
gagggcgcgccgccgctcatcgcctggtcgccgcgtagcggcgatgatcccgcgccgatc
gccgaggcgcggaagcggcagcgcgaggcctcgatgcgcgagtaccgccggctcctctac
gtcgcgatgacgcgcgccgaggagcggctctacctcgccgccttctacaacatccacaag
ccgccagaggattgctggagcgcgatggccgagaccgtgttcggcgaggccgagacggtg
gcggccttctgggacgaggccgaggtcgtgcgccgcatccacaggcccggcgcgcccgcc
accggcgcggcgccgcgggcccagcacgagcagggccgcttcccgacgccgccgccgtgg
ctcggccagcccgtcgcgccgccggcctcgccgaagccgccgcaacgcgcgacccgcgtc
gccgccgcgccgtcgcccgagcggcgccgggcgctggcctatggcgaggcgctgcatctt
ctgctgcaggcgctccccgcgcatccgccgggcgagcgggaggccgcagcgcacgccctc
ctcgccgcgcagcctggcctggcgcctgagcccgagcgtgccggcctcatcgccgaggcc
ctcgccgtgatggcgctgcccgagctcgcgccgctgttcggtcccggcgcgcgtgcggag
gtccctgtgctcggccgcacgacgcgggcggacggcagcgaggtcgaggtctccggcaag
gtcgatcgcctggtcgtgacgcccgacgccgtcctcatcgccgacttcaagagcggcccg
gcccacgccgtcgtcccacccgactaccgccgtcagatgcagctctaccacagcgtcctg
gcgccgctctggccggagcggccgctgcgcctgctgctcgtctggacgagcgtcccgcgc
gtcgtcgacctcaccgccgagcctcccgccgcaagttga
DBGET
integrated database retrieval system
