Bdellovibrio bacteriovorus Tiberius: Bdt_3443
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Entry
Bdt_3443 CDS
T02356
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bbat
Bdellovibrio bacteriovorus Tiberius
Pathway
bbat00540
Lipopolysaccharide biosynthesis
bbat01100
Metabolic pathways
bbat01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bbat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Bdt_3443 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bbat01005
]
Bdt_3443 (rfaD)
Enzymes [BR:
bbat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Bdt_3443 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bbat01005
]
Core region
Bdt_3443 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AFY03118
UniProt:
K7YZD9
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All DBs
Position
3661615..3662583
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AA seq
322 aa
AA seq
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MIIVTGANGFIGSVMVWELNQKGLTDIIAVDSVGLSERNLLRKQKITKFLLKDDLWPFLE
TEEAKKQVTWIIHMGACSSTTETNKEFLWENNTYYTQRIFEWCAEHGKSMIYASSAATYG
AGELGFDDTTDPEKLRPLNLYGESKVLFDRWAVKQTKTPPHWYGLKFFNVFGPNEYHKGA
MSSVAFKAYNQIKDTGALGLFKSADPNYKDGEFMRDFVYVKDVTGWMAELMEKKPKNGVY
NMGFGKPRTWLDLAGGVFKAMGTDMKINWLEMPENIRGQYQYFTEAKTDKWLAAGMSPAK
WPLEKAVADYIQNYLSKDDKDL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaacaggcgcaaacggatttattggcagtgtgatggtgtgggaactgaat
caaaaaggtcttaccgacatcatcgcggtggactcagtaggtctttccgaacgcaatctt
cttcgcaaacaaaaaatcaccaagttccttttgaaagatgacttgtggccgttccttgaa
accgaagaagccaagaaacaagtcacgtggatcatccacatgggcgcctgctcttccacc
acggaaacaaacaaagagttcctgtgggagaacaacacttactacacacaaagaatcttt
gaatggtgcgcagaacacggcaagtccatgatttatgcctccagtgccgcaacttacggc
gccggagaactgggctttgacgacacgactgatcctgaaaaactgcgcccattgaatctg
tacggcgaatcaaaagttctgtttgatcgctgggcggtgaaacagacgaaaacgcctcca
cactggtacggccttaagttctttaacgtctttggcccgaatgaataccacaagggcgcg
atgtccagcgtggcgttcaaagcttacaatcaaatcaaagacaccggcgctttgggattg
tttaaatccgcagacccgaactacaaagacggcgaattcatgcgggacttcgtttacgtc
aaggacgtcaccggctggatggccgagctgatggagaaaaaaccaaagaatggcgtttac
aacatgggcttcggaaaaccgcgcacctggctggatctggccggtggtgttttcaaggcc
atgggcacggacatgaaaatcaactggcttgagatgcctgaaaacatccgcggtcagtat
cagtatttcaccgaagctaaaaccgacaagtggctggcagcgggtatgagcccggcaaaa
tggcctttggaaaaagccgtcgctgattacattcagaactatctgtccaaagacgacaaa
gacctttaa
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