Bacteroidetes bacterium: AEM51_02120
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Entry
AEM51_02120 CDS
T04336
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbau
Bacteroidetes bacterium
Pathway
bbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEM51_02120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbau03019
]
AEM51_02120
03400 DNA repair and recombination proteins [BR:
bbau03400
]
AEM51_02120
Enzymes [BR:
bbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AEM51_02120
Messenger RNA biogenesis [BR:
bbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AEM51_02120
DNA repair and recombination proteins [BR:
bbau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AEM51_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
RecQ_Zn_bind
HRDC
ResIII
HTH_40
SNF2-rel_dom
Helicase_Sgs1
FANCI_HD1
Motif
Other DBs
NCBI-ProteinID:
AMS25987
UniProt:
A0A142L191
LinkDB
All DBs
Position
506504..508726
Genome browser
AA seq
740 aa
AA seq
DB search
MKAAKTVKKTTKSTALKGVKESLQEFFGFDSFKGDQETIINSLLNGDDTFVIMPTGGGKS
LCYQLPALMMPGTAIIISPLIALMKNQVDQIRAFNHGTVAHFLNSSLSKTEITKVKHDVT
EGSTKMLYIAPETLKKDETIDFLKSINISFVAVDEAHCISEWGHDFRPEYRRIKQMIKEI
KDVPMMALTATATPKVQQDIQKNLQMNDALVYKSSFNRTNLYYEVRPKGKKADVMKDLVS
YVKTKKGKSGVIYCLSRKKVEEIAEVLKANGVKALPYHAGLDAKTRAAHQDAFLMESTDV
IVATIAFGMGIDKPDVRFVIHYDVPKSIEGYYQETGRAGRDGIDGDCVLYYNPADIDKLE
KFMKDKPVAEREIGELLIFETQAFAETSACRRKFLLHYFGEEYDDKGCGKMCDNCRHPKA
KEDAKAEAVLALQLIKEIDEKHVLKHIVDILIGNKTHDVTLNDHQKLSSFGKGKNYDDNY
WKSLIRVLLLQGFITKNIENYGLLSISDKGETFIKKPTKFEIAVDQKFDKVLESDDDGVE
AENVYDEVLFVMLKDLTRKVGKQMNLPPYVIFQEPSLEEMAFKFPITIDELSKVSGVNKG
KAVKYGKQFIELIGKYVEDNNIERSEDVVVKSVVNKSAKKISIITSIDKKQSLEDIARSI
GLTMPELLDEIQNIVLSGTKLNLKTYINDIADEDIQDEVMDFFKKSEKDSLEEVLAGYGS
EFSKEDLQLMRIHFISEVAY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgcaaaaacggtaaaaaagacgaccaaatctactgccttaaaaggcgtgaaa
gaaagtctgcaagaattttttggatttgattcattcaaaggcgaccaagaaaccatcatc
aatagtttattgaatggtgatgatacgtttgttattatgccaacgggaggaggtaaatct
ctttgttaccaattaccagctctaatgatgcctggaacagctattattatttcaccgctt
attgcgttaatgaaaaatcaggttgaccagattcgtgccttcaaccacggaacagtggcg
cattttctaaattcatcgttatcaaaaacagagataacaaaagtgaagcacgatgtaacc
gaaggcagtactaagatgctgtacatcgctccggaaacattgaagaaagatgaaacaatt
gatttcttaaaaagcattaatatttcatttgttgccgttgatgaggctcattgtatctcg
gagtggggtcatgattttcgtcctgagtatcgcagaataaagcagatgataaaggaaata
aaagatgttccgatgatggctttaactgcaactgcaacgcccaaagttcaacaggatatt
caaaagaatttgcagatgaatgatgcacttgtatacaagtcatcatttaaccgcaccaat
ttatattacgaggtaagacccaaaggtaaaaaggccgatgtgatgaaagatttggtttcg
tatgtaaaaaccaaaaagggaaagtcgggagttatttattgcttgagccgtaaaaaggtt
gaagagattgccgaagtattgaaagcgaatggtgttaaagcattaccatatcatgcaggt
ctagatgccaaaacacgtgctgcccatcaggatgcatttttgatggaaagcacagacgtt
attgtggcaactattgcttttggaatgggtattgacaagccggatgttcgttttgtgatt
cactatgatgtgccgaagagtattgaaggatattaccaagaaacaggtcgtgccgggcgt
gatggcattgatggcgattgtgttttatattacaatccagctgatattgataagcttgaa
aagtttatgaaagacaagcccgttgccgagagggaaataggggagttattgattttcgaa
acacaagcatttgccgaaacgtctgcttgccgcagaaaattcttattgcattattttggt
gaagagtatgatgataaaggttgcggtaaaatgtgcgacaattgccgtcatccaaaagca
aaagaagatgcgaaagcagaagcagttttagcattacaactcattaaagagattgatgaa
aagcacgttttaaagcacatagttgatattttgattggtaacaaaacacatgatgtaacc
ttaaacgaccaccaaaaactatcatcatttggtaaaggaaaaaattatgatgataactac
tggaaatcattaattagagtattgttgttacaaggattcattacaaaaaatattgaaaac
tatggattgttgagcatcagcgacaaaggcgaaacgtttattaaaaaacctactaagttt
gaaattgcggttgatcagaagtttgataaggtactggaaagcgatgatgatggtgtagaa
gctgaaaacgtttatgatgaagtgctttttgtgatgcttaaagatttaacacgtaaggtt
ggaaagcaaatgaacctgcctccttacgtgatttttcaggaaccatcgttggaggaaatg
gccttcaaatttccaataacaattgatgaattgagcaaggtaagcggtgtaaacaaagga
aaagccgtgaagtatggaaaacagtttatcgagttaatcggtaaatatgttgaggacaat
aatattgagcgttcggaagatgtagtggtaaaatcggtggtcaacaaatcggccaaaaag
atttcgattattaccagtattgataaaaaacaaagtttagaagatattgcccgtagtatt
ggattaaccatgcctgaactgttggatgaaattcagaacattgttttatctggcaccaaa
ctcaaccttaaaacatacattaatgatattgccgatgaggatattcaagatgaggtgatg
gatttctttaaaaagagcgaaaaggattcgttggaggaagtgcttgccggatatggaagc
gaattttcgaaagaagatcttcaattgatgcgaattcattttatttcagaggtggcctat
taa
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