Burkholderiales bacterium YL45: A4V04_08825
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Entry
A4V04_08825 CDS
T04607
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bbay
Burkholderiales bacterium YL45
Pathway
bbay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4V04_08825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbay03400
]
A4V04_08825
DNA repair and recombination proteins [BR:
bbay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4V04_08825
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4V04_08825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_23
nSTAND3
AAA_33
AAA_21
AAA_22
DnaJ_CXXCXGXG
AAA_25
APS_kinase
NACHT
Viral_helicase1
cobW
BCA_ABC_TP_C
MMR_HSR1
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ANU66507
LinkDB
All DBs
Position
complement(1973999..1976842)
Genome browser
AA seq
947 aa
AA seq
DB search
MKEIVIQGARTHNLKNVDLSLPRGKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLEQMEKPDVDHIEGLSPAISIEQKSTNRSPRSTVGTITEIYDYLRLLFARVGVPHC
PTHGTALHASSVSEIVDRIIEFKEDGSKLMIVAPVCRASSKVIRHKTEDLQSRGFTRFQI
DGNVCTVPDLPALDDDENHQLNVVVDRLKMRPDIRQRLAESIETSLLIGDGMVLIEDLES
GQTERFSNKFACPDCGFTMDRLEPNMFSFNSPAGACEVCGGLGEAEEFDAEKFISLPDLS
LKDGAIDGWGMLNPYNYQLLEAVAVKFNIPLTEPWNRLSKQQQDIILYGSGKEEIPVVFK
DGEGREIQRNQLFEGVIPITKRRFDGASNEALKKELGKYRTLRPCSACCGSRLNVASSNV
RIGEGQQQRTISQITSLSLKEALEYFKKLSLSGARAEIGGKLIQEIISRLGFLNNVGLEY
LTLSRPAATLSGGESQRIRLASQVGSQLSGVMYVLDEPSIGLHQCDNDRLIATLKGLRDL
GNSVIVVEHDEDTIREADYIVDMGPGAGRLGGEVIAQGTPKEVEKNPNSLTGKYLTGELK
IRTLKKTKPGKDFIKIYGASGNNLKNVDVSIPVGLMTVVTGVSGSGKSTLVNETLYAYAA
NVLNRAKKTPQPFEKIEGLENFDKVIHVDQDPIGKTPRSNPATYCGIFGPIRDLFAETPI
ARERGYGSARFSFNVKGGRCEACEGEGLVKVEMNFLPDMYVPCDHCHGMRYNRETLEVLY
KGLNIAQVLDLTVDQAAEFFAAVPVIYKKLQTLQEVGLGYIKLGQSATTLSGGEAQRIKL
ALELAKRSTGKTLYILDEPTTGLHFKDVDMLLAVLEKLKKAGNTLLIIEHNLEVVREADW
VIDIGPGGGADGGQVVAVGAPETISENPSSRTGKYLGNLTKRRGSLE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagattgttatacaaggggcacgaacccacaatctgaaaaatgtggacttgtcc
ctgccaagaggcaaactggtagtcattacaggactttccggatccggtaagagttctttg
gcatttgatacgttatatgccgaaggacagagaaggtatgtggaaagtttgtctacgtat
gcccgtcaattcttggaacaaatggaaaagcccgatgtagatcacattgaagggctttct
ccggcaatttctatcgagcaaaaaagtacaaatagaagtccgcgttcaacggtcggtact
attacagaaatctacgattatttgagactgctgtttgcaagagtgggggttcctcactgc
ccgactcacggaacggcgctgcacgcttcaagcgtaagcgaaatcgtagacagaattatt
gagtttaaggaggacggctccaaactcatgatagtcgcaccggtttgccgtgcctcttca
aaagttatccgacataaaacggaagacctccaaagcagaggctttacccgttttcagata
gacggaaatgtctgcacggttccggatttgcctgcactcgacgatgatgaaaaccatcag
ctcaatgtcgttgtagatcgtcttaaaatgcgccccgatattcgtcagagattggccgag
tccattgaaacgtctttgcttatcggtgacggcatggttcttatcgaggacttggaatcg
gggcaaaccgaacgtttttcaaacaagttcgcttgcccggattgcggctttacgatggat
cggttagaacccaacatgttctctttcaatagtccggccggagcttgtgaagtttgcggg
ggactcggggaagccgaagaattcgatgcggaaaaatttatttctcttccggatttgtcg
ctgaaagatggagcgatcgacggctgggggatgctcaacccatataactatcagttgctg
gaagcggtagccgttaaatttaatattcctctgacagagccgtggaaccgcctctctaaa
cagcagcaagatattattttgtacggctccggtaaagaagaaatcccggtcgtattcaaa
gacggagagggaagagaaatccaaaggaaccagctctttgaaggtgttattccgattacg
aagagaagatttgacggagcctcaaatgaagcattaaaaaaggagctcggaaaataccga
actctcagaccgtgttctgcttgctgcggttcgcggcttaatgtggcttcttcgaatgtt
cgaatcggagagggtcaacagcagagaacaatttctcaaataacaagcttatctttaaaa
gaagctctcgaatacttcaaaaaactctctttgtcaggggcaagagcagaaatcggcgga
aagctgatacaagaaataattagcaggcttgggtttttaaataacgtcgggctcgaatat
ttaacattgagtcgtcctgctgcaacgctttccggcggagagtctcagcgtatccgttta
gccagccaagtcggttctcagctttccggtgtgatgtatgttttagatgagccttcgatc
ggtcttcaccaatgcgataacgacaggctgattgctactctgaaaggactcagagacttg
ggaaattccgttattgtcgttgagcatgatgaggataccattcgtgaggcagattacatc
gttgacatggggcccggggccggaagacttggcggtgaagtaatcgcacaaggaactccg
aaagaagtggaaaagaatccgaattcgcttacagggaaatatttgacgggcgaattaaag
attcgtactttgaagaagaccaagccgggaaaagatttcatcaaaatttacggagcttcg
ggcaataatcttaaaaacgttgatgtcagcattccggtcggcttgatgacggtggttacc
ggtgtgtccgggtccggtaaatctacgttggtcaatgagacgctttatgcgtatgcggca
aatgtcttaaaccgtgcgaaaaagacgccccagccttttgaaaaaatcgaaggattggaa
aatttcgataaagtcattcacgtcgatcaagatcctattggaaagacgcctagatctaat
ccggcgacatactgcggtattttcggtccgatcagagatttgtttgcggaaacgccgata
gccagagaaagagggtatggttcggcacgcttttctttcaacgtgaagggcggacgatgc
gaagcatgtgaaggagaagggctggttaaagtcgaaatgaacttccttcctgatatgtac
gtgccttgcgatcactgccacggaatgcgatataaccgtgaaacgttagaggttctgtac
aaagggcttaatatcgcccaagtattagatttaacagttgatcaggcggctgagtttttt
gctgccgttcctgttatttataaaaaacttcaaaccctgcaggaggtcggcctcggctat
atcaaactaggccaaagcgctacgactttgtcgggtggagaagcacaacgaattaagcta
gcattagaactagccaagagatcaaccggcaagactctttatattttggatgaaccgacg
acaggtttgcactttaaagatgtggacatgttattagcggtacttgaaaaattaaagaaa
gcaggtaatactttactaattattgagcataacttggaagtggttagagaagctgactgg
gtgattgacataggcccgggcggtggagcggatggcggtcaggtggtcgctgtcggcgcc
ccggaaacaataagcgaaaacccctctagccgaacaggtaaatatctaggaaacttgaca
aaaagaagaggttcccttgaataa
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