KEGG   Burkholderiales bacterium YL45: A4V04_08825
Entry
A4V04_08825       CDS       T04607                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bbay  Burkholderiales bacterium YL45
Pathway
bbay03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4V04_08825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbay03400]
    A4V04_08825
DNA repair and recombination proteins [BR:bbay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4V04_08825
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A4V04_08825
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 AAA_23 nSTAND3 AAA_33 AAA_21 AAA_22 DnaJ_CXXCXGXG AAA_25 APS_kinase NACHT Viral_helicase1 cobW BCA_ABC_TP_C MMR_HSR1 Zn-ribbon_8
Other DBs
NCBI-ProteinID: ANU66507
LinkDB
Position
complement(1973999..1976842)
AA seq 947 aa
MKEIVIQGARTHNLKNVDLSLPRGKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLEQMEKPDVDHIEGLSPAISIEQKSTNRSPRSTVGTITEIYDYLRLLFARVGVPHC
PTHGTALHASSVSEIVDRIIEFKEDGSKLMIVAPVCRASSKVIRHKTEDLQSRGFTRFQI
DGNVCTVPDLPALDDDENHQLNVVVDRLKMRPDIRQRLAESIETSLLIGDGMVLIEDLES
GQTERFSNKFACPDCGFTMDRLEPNMFSFNSPAGACEVCGGLGEAEEFDAEKFISLPDLS
LKDGAIDGWGMLNPYNYQLLEAVAVKFNIPLTEPWNRLSKQQQDIILYGSGKEEIPVVFK
DGEGREIQRNQLFEGVIPITKRRFDGASNEALKKELGKYRTLRPCSACCGSRLNVASSNV
RIGEGQQQRTISQITSLSLKEALEYFKKLSLSGARAEIGGKLIQEIISRLGFLNNVGLEY
LTLSRPAATLSGGESQRIRLASQVGSQLSGVMYVLDEPSIGLHQCDNDRLIATLKGLRDL
GNSVIVVEHDEDTIREADYIVDMGPGAGRLGGEVIAQGTPKEVEKNPNSLTGKYLTGELK
IRTLKKTKPGKDFIKIYGASGNNLKNVDVSIPVGLMTVVTGVSGSGKSTLVNETLYAYAA
NVLNRAKKTPQPFEKIEGLENFDKVIHVDQDPIGKTPRSNPATYCGIFGPIRDLFAETPI
ARERGYGSARFSFNVKGGRCEACEGEGLVKVEMNFLPDMYVPCDHCHGMRYNRETLEVLY
KGLNIAQVLDLTVDQAAEFFAAVPVIYKKLQTLQEVGLGYIKLGQSATTLSGGEAQRIKL
ALELAKRSTGKTLYILDEPTTGLHFKDVDMLLAVLEKLKKAGNTLLIIEHNLEVVREADW
VIDIGPGGGADGGQVVAVGAPETISENPSSRTGKYLGNLTKRRGSLE
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgaaagagattgttatacaaggggcacgaacccacaatctgaaaaatgtggacttgtcc
ctgccaagaggcaaactggtagtcattacaggactttccggatccggtaagagttctttg
gcatttgatacgttatatgccgaaggacagagaaggtatgtggaaagtttgtctacgtat
gcccgtcaattcttggaacaaatggaaaagcccgatgtagatcacattgaagggctttct
ccggcaatttctatcgagcaaaaaagtacaaatagaagtccgcgttcaacggtcggtact
attacagaaatctacgattatttgagactgctgtttgcaagagtgggggttcctcactgc
ccgactcacggaacggcgctgcacgcttcaagcgtaagcgaaatcgtagacagaattatt
gagtttaaggaggacggctccaaactcatgatagtcgcaccggtttgccgtgcctcttca
aaagttatccgacataaaacggaagacctccaaagcagaggctttacccgttttcagata
gacggaaatgtctgcacggttccggatttgcctgcactcgacgatgatgaaaaccatcag
ctcaatgtcgttgtagatcgtcttaaaatgcgccccgatattcgtcagagattggccgag
tccattgaaacgtctttgcttatcggtgacggcatggttcttatcgaggacttggaatcg
gggcaaaccgaacgtttttcaaacaagttcgcttgcccggattgcggctttacgatggat
cggttagaacccaacatgttctctttcaatagtccggccggagcttgtgaagtttgcggg
ggactcggggaagccgaagaattcgatgcggaaaaatttatttctcttccggatttgtcg
ctgaaagatggagcgatcgacggctgggggatgctcaacccatataactatcagttgctg
gaagcggtagccgttaaatttaatattcctctgacagagccgtggaaccgcctctctaaa
cagcagcaagatattattttgtacggctccggtaaagaagaaatcccggtcgtattcaaa
gacggagagggaagagaaatccaaaggaaccagctctttgaaggtgttattccgattacg
aagagaagatttgacggagcctcaaatgaagcattaaaaaaggagctcggaaaataccga
actctcagaccgtgttctgcttgctgcggttcgcggcttaatgtggcttcttcgaatgtt
cgaatcggagagggtcaacagcagagaacaatttctcaaataacaagcttatctttaaaa
gaagctctcgaatacttcaaaaaactctctttgtcaggggcaagagcagaaatcggcgga
aagctgatacaagaaataattagcaggcttgggtttttaaataacgtcgggctcgaatat
ttaacattgagtcgtcctgctgcaacgctttccggcggagagtctcagcgtatccgttta
gccagccaagtcggttctcagctttccggtgtgatgtatgttttagatgagccttcgatc
ggtcttcaccaatgcgataacgacaggctgattgctactctgaaaggactcagagacttg
ggaaattccgttattgtcgttgagcatgatgaggataccattcgtgaggcagattacatc
gttgacatggggcccggggccggaagacttggcggtgaagtaatcgcacaaggaactccg
aaagaagtggaaaagaatccgaattcgcttacagggaaatatttgacgggcgaattaaag
attcgtactttgaagaagaccaagccgggaaaagatttcatcaaaatttacggagcttcg
ggcaataatcttaaaaacgttgatgtcagcattccggtcggcttgatgacggtggttacc
ggtgtgtccgggtccggtaaatctacgttggtcaatgagacgctttatgcgtatgcggca
aatgtcttaaaccgtgcgaaaaagacgccccagccttttgaaaaaatcgaaggattggaa
aatttcgataaagtcattcacgtcgatcaagatcctattggaaagacgcctagatctaat
ccggcgacatactgcggtattttcggtccgatcagagatttgtttgcggaaacgccgata
gccagagaaagagggtatggttcggcacgcttttctttcaacgtgaagggcggacgatgc
gaagcatgtgaaggagaagggctggttaaagtcgaaatgaacttccttcctgatatgtac
gtgccttgcgatcactgccacggaatgcgatataaccgtgaaacgttagaggttctgtac
aaagggcttaatatcgcccaagtattagatttaacagttgatcaggcggctgagtttttt
gctgccgttcctgttatttataaaaaacttcaaaccctgcaggaggtcggcctcggctat
atcaaactaggccaaagcgctacgactttgtcgggtggagaagcacaacgaattaagcta
gcattagaactagccaagagatcaaccggcaagactctttatattttggatgaaccgacg
acaggtttgcactttaaagatgtggacatgttattagcggtacttgaaaaattaaagaaa
gcaggtaatactttactaattattgagcataacttggaagtggttagagaagctgactgg
gtgattgacataggcccgggcggtggagcggatggcggtcaggtggtcgctgtcggcgcc
ccggaaacaataagcgaaaacccctctagccgaacaggtaaatatctaggaaacttgaca
aaaagaagaggttcccttgaataa

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