KEGG   Bifidobacterium animalis subsp. lactis BB-12: BIF_00588
Entry
BIF_00588         CDS       T01840                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bbb  Bifidobacterium animalis subsp. lactis BB-12
Brite
KEGG Orthology (KO) [BR:bbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbb03019]
    BIF_00588 (orn)
   03009 Ribosome biogenesis [BR:bbb03009]
    BIF_00588 (orn)
Messenger RNA biogenesis [BR:bbb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BIF_00588 (orn)
Ribosome biogenesis [BR:bbb03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    BIF_00588 (orn)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ADC85556
LinkDB
Position
628891..629544
AA seq 217 aa
MVDANDALTYSPETSRMIWIDCEMTGLDIFHDELCEVSVVPTDFELNVLDKGIDLVIKPS
EAAVAHMDDFVRAMHTRSGLIDEWENGLSVQEAERQVIDYVQQFIPQGVKPLLAGNSVGS
DKKFLDRFMPNLMEHLHYRVIDVSTIKELARRWYPAVYENRPPKNGGHRAWADIVESLDE
LRYYRAAIMAPEPGPDTVQSKRIAEQIVATSVMNEAE
NT seq 654 nt   +upstreamnt  +downstreamnt
atggtagacgcaaacgacgcgctgacgtattcgcctgagacatcgcgcatgatctggatc
gactgcgagatgaccggactcgacatcttccacgatgaactgtgcgaggtctccgtggtg
cccacggatttcgagctcaatgtgctcgacaaaggaatcgatttggtgatcaagccgtcg
gaggccgctgtcgcccatatggacgatttcgtgcgtgcgatgcacacccgttccggcctc
atcgacgagtgggagaacggcttgtcggtgcaggaagccgagcgtcaggtgatcgactat
gtgcaacaattcattccgcagggcgtcaaaccattgctcgccggcaattcggtcggttcc
gacaagaagttcctcgaccgcttcatgccgaatctcatggagcacctgcattaccgcgtg
atcgacgtgagcacgatcaaggaactcgcgcgccgctggtacccggcggtctacgagaac
cggccgccgaagaacggcggccaccgcgcatgggccgacatcgtcgagtcgcttgacgag
ttgcggtactaccgcgcagccatcatggcgcccgaacccggtcccgacaccgtgcagtcc
aagcgcatcgccgagcagatcgtcgcgacgagcgtgatgaatgaggccgaataa

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