Bifidobacterium animalis subsp. lactis BB-12: BIF_00588
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Entry
BIF_00588 CDS
T01840
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbb03019
]
BIF_00588 (orn)
03009 Ribosome biogenesis [BR:
bbb03009
]
BIF_00588 (orn)
Messenger RNA biogenesis [BR:
bbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BIF_00588 (orn)
Ribosome biogenesis [BR:
bbb03009
]
Eukaryotic type
Pre-60S particles
RNases
BIF_00588 (orn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADC85556
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All DBs
Position
628891..629544
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AA seq
217 aa
AA seq
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MVDANDALTYSPETSRMIWIDCEMTGLDIFHDELCEVSVVPTDFELNVLDKGIDLVIKPS
EAAVAHMDDFVRAMHTRSGLIDEWENGLSVQEAERQVIDYVQQFIPQGVKPLLAGNSVGS
DKKFLDRFMPNLMEHLHYRVIDVSTIKELARRWYPAVYENRPPKNGGHRAWADIVESLDE
LRYYRAAIMAPEPGPDTVQSKRIAEQIVATSVMNEAE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgcaaacgacgcgctgacgtattcgcctgagacatcgcgcatgatctggatc
gactgcgagatgaccggactcgacatcttccacgatgaactgtgcgaggtctccgtggtg
cccacggatttcgagctcaatgtgctcgacaaaggaatcgatttggtgatcaagccgtcg
gaggccgctgtcgcccatatggacgatttcgtgcgtgcgatgcacacccgttccggcctc
atcgacgagtgggagaacggcttgtcggtgcaggaagccgagcgtcaggtgatcgactat
gtgcaacaattcattccgcagggcgtcaaaccattgctcgccggcaattcggtcggttcc
gacaagaagttcctcgaccgcttcatgccgaatctcatggagcacctgcattaccgcgtg
atcgacgtgagcacgatcaaggaactcgcgcgccgctggtacccggcggtctacgagaac
cggccgccgaagaacggcggccaccgcgcatgggccgacatcgtcgagtcgcttgacgag
ttgcggtactaccgcgcagccatcatggcgcccgaacccggtcccgacaccgtgcagtcc
aagcgcatcgccgagcagatcgtcgcgacgagcgtgatgaatgaggccgaataa
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