KEGG   Salisediminibacterium beveridgei: BBEV_1759
Entry
BBEV_1759         CDS       T05114                                 
Symbol
rny
Name
(GenBank) Hydrolase (HAD superfamily)
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bbev  Salisediminibacterium beveridgei
Pathway
bbev03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbev00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBEV_1759 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbev03019]
    BBEV_1759 (rny)
Messenger RNA biogenesis [BR:bbev03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BBEV_1759 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH HHH_5 KH_2 BatA WDCP DUF2232 Exonuc_VII_L
Other DBs
NCBI-ProteinID: AOM83120
UniProt: A0A1D7QVT1
LinkDB
Position
complement(1895289..1896851)
AA seq 520 aa
MDLIYQILALLLVAVIGILIGYFIRKSLAEAKISSAEALAKQTVEEARREADASRKEAVL
EAKDEAHRLRMDAEKEVRDRRNEMSKQENRLLQKEEVLDRKSGTLDKKEESLETREENLS
KRQHEIDELNSEVEELVNKQKAELERISGFSKDEARDIIMETIEKELVHEKAVLIKDSVT
KAKEEADKKAKEILSTSIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRALETLT
GIDLIIDDTPEAVILSGFDPIRREIAKTTLEKLVQDGRIHPARIEETVEKARREVDELIR
EYGEQTTFEMGIHNLHPDLIKILGRLKFRTSYGQNVLKHSMEVAHLSAMMAAELGEDETL
AKRAGLLHDLGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTESTSVISTLV
AAADALSAARPGARRETLETYIKRLEKLEEISESFDGVEKTYAIQAGREVRIMVKPDFIT
DEDSYRLARDITKKIEDELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
ttggacttgatctatcaaatcctcgctttgctattagtagcagttattggaattctgatc
ggttatttcattcgaaaatccttggcagaagcaaagatctcaagtgcggaagccctcgca
aagcagacagtggaagaagctagacgcgaagcggacgcgagtagaaaagaagctgtcctt
gaagcgaaagatgaagcacacagacttcgcatggatgcggagaaagaagtgcgggatcgc
agaaatgaaatgtcgaaacaggaaaaccgcctacttcaaaaagaagaagtgctggatcga
aaaagtggaacgcttgataaaaaagaggaatctcttgaaaccagagaggagaatctatcg
aagcgtcagcatgaaatcgacgaactgaatagcgaagttgaggaactagtcaacaagcag
aaagctgaacttgaacgaatatccggtttctcaaaagacgaagctcgggatattatcatg
gaaacgatagaaaaggaacttgtccatgagaaagcggttcttattaaagattcggtcaca
aaagcgaaagaagaagcagataagaaagcgaaagaaattctgtctacttcgattcagcga
tgtgcagcggatcatgtggcagaaacaactgtatctgtcgtgaatcttccgaacgatgaa
atgaaaggacgtattatcggacgtgaaggccgtaatatcagagcacttgaaaccttaacg
gggattgatctgattattgatgatacgccggaagccgtcattttgtctggttttgatcca
atccgtcgggaaatagcaaaaacgacgttggaaaaacttgttcaggatggtcggattcac
cctgcccgcattgaagagactgtcgaaaaagcaagacgtgaagttgacgagttgattcgc
gagtatggggaacagacaacatttgaaatgggcatccacaatcttcatcccgatctgatt
aaaattctcggacgtctgaaattccgcacaagctatggtcaaaacgtgcttaagcattcc
atggaggtcgcacacctcagcgcgatgatggctgcagaacttggtgaggatgaaacactt
gcaaaacgtgcaggccttcttcatgatcttggtaaggcgattgaccatgaagtggaaggc
agtcatgttgaaattggcgtggagcttgcaacaaagtataaggaacatcccgttgttatt
aacagcattgcatcacaccatggtgataccgaatcaacatctgttatttctacactggtt
gcagctgctgatgcactatcggctgcaagacccggtgcacgaagggaaacgcttgagacg
tatattaaacgccttgagaagcttgaggaaatatcagaatcctttgatggtgtagagaaa
acgtatgccattcaggctggacgtgaagtcagaattatggttaaaccggacttcatcacg
gacgaagattcctatcgccttgcaagggatatcaccaaaaaaattgaagatgaactcgac
tatcccggtcacattaaagtcacagtgattcgtgaaacaagagctgtcgagtatgcgaaa
taa

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