Salisediminibacterium beveridgei: BBEV_1759
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Entry
BBEV_1759 CDS
T05114
Symbol
rny
Name
(GenBank) Hydrolase (HAD superfamily)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bbev
Salisediminibacterium beveridgei
Pathway
bbev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBEV_1759 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbev03019
]
BBEV_1759 (rny)
Messenger RNA biogenesis [BR:
bbev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBEV_1759 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
HHH_5
KH_2
BatA
WDCP
DUF2232
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AOM83120
UniProt:
A0A1D7QVT1
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Position
complement(1895289..1896851)
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AA seq
520 aa
AA seq
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MDLIYQILALLLVAVIGILIGYFIRKSLAEAKISSAEALAKQTVEEARREADASRKEAVL
EAKDEAHRLRMDAEKEVRDRRNEMSKQENRLLQKEEVLDRKSGTLDKKEESLETREENLS
KRQHEIDELNSEVEELVNKQKAELERISGFSKDEARDIIMETIEKELVHEKAVLIKDSVT
KAKEEADKKAKEILSTSIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRALETLT
GIDLIIDDTPEAVILSGFDPIRREIAKTTLEKLVQDGRIHPARIEETVEKARREVDELIR
EYGEQTTFEMGIHNLHPDLIKILGRLKFRTSYGQNVLKHSMEVAHLSAMMAAELGEDETL
AKRAGLLHDLGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTESTSVISTLV
AAADALSAARPGARRETLETYIKRLEKLEEISESFDGVEKTYAIQAGREVRIMVKPDFIT
DEDSYRLARDITKKIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttggacttgatctatcaaatcctcgctttgctattagtagcagttattggaattctgatc
ggttatttcattcgaaaatccttggcagaagcaaagatctcaagtgcggaagccctcgca
aagcagacagtggaagaagctagacgcgaagcggacgcgagtagaaaagaagctgtcctt
gaagcgaaagatgaagcacacagacttcgcatggatgcggagaaagaagtgcgggatcgc
agaaatgaaatgtcgaaacaggaaaaccgcctacttcaaaaagaagaagtgctggatcga
aaaagtggaacgcttgataaaaaagaggaatctcttgaaaccagagaggagaatctatcg
aagcgtcagcatgaaatcgacgaactgaatagcgaagttgaggaactagtcaacaagcag
aaagctgaacttgaacgaatatccggtttctcaaaagacgaagctcgggatattatcatg
gaaacgatagaaaaggaacttgtccatgagaaagcggttcttattaaagattcggtcaca
aaagcgaaagaagaagcagataagaaagcgaaagaaattctgtctacttcgattcagcga
tgtgcagcggatcatgtggcagaaacaactgtatctgtcgtgaatcttccgaacgatgaa
atgaaaggacgtattatcggacgtgaaggccgtaatatcagagcacttgaaaccttaacg
gggattgatctgattattgatgatacgccggaagccgtcattttgtctggttttgatcca
atccgtcgggaaatagcaaaaacgacgttggaaaaacttgttcaggatggtcggattcac
cctgcccgcattgaagagactgtcgaaaaagcaagacgtgaagttgacgagttgattcgc
gagtatggggaacagacaacatttgaaatgggcatccacaatcttcatcccgatctgatt
aaaattctcggacgtctgaaattccgcacaagctatggtcaaaacgtgcttaagcattcc
atggaggtcgcacacctcagcgcgatgatggctgcagaacttggtgaggatgaaacactt
gcaaaacgtgcaggccttcttcatgatcttggtaaggcgattgaccatgaagtggaaggc
agtcatgttgaaattggcgtggagcttgcaacaaagtataaggaacatcccgttgttatt
aacagcattgcatcacaccatggtgataccgaatcaacatctgttatttctacactggtt
gcagctgctgatgcactatcggctgcaagacccggtgcacgaagggaaacgcttgagacg
tatattaaacgccttgagaagcttgaggaaatatcagaatcctttgatggtgtagagaaa
acgtatgccattcaggctggacgtgaagtcagaattatggttaaaccggacttcatcacg
gacgaagattcctatcgccttgcaagggatatcaccaaaaaaattgaagatgaactcgac
tatcccggtcacattaaagtcacagtgattcgtgaaacaagagctgtcgagtatgcgaaa
taa
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