KEGG   Salisediminibacterium beveridgei: BBEV_3254
Entry
BBEV_3254         CDS       T05114                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bbev  Salisediminibacterium beveridgei
Pathway
bbev03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bbev00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBEV_3254 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbev03021]
    BBEV_3254 (rpoB)
   03400 DNA repair and recombination proteins [BR:bbev03400]
    BBEV_3254 (rpoB)
Enzymes [BR:bbev01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BBEV_3254 (rpoB)
Transcription machinery [BR:bbev03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BBEV_3254 (rpoB)
DNA repair and recombination proteins [BR:bbev03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BBEV_3254 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AOM84569
UniProt: A0A1D7QZZ9
LinkDB
Position
complement(3455429..3458905)
AA seq 1158 aa
MDLPNLIEIQTASYQWFLDEGVREMFQDISPISDFTGNLVLEFIDYSLGEPKYPVDESKE
RDVTYSAPLRVKVRLINQETGEVKEQEVFMGDFPLMTDTGTFVINGAERVIVSQLVRSPS
VYFNKKVDKNGKKGHTATVIPNRGAWLELETDAKDVVYCRIDRTRKIPATVLLRALGFGT
DQEIIDLLGEDEYLRNTLDKDNTDSSEKALLEIYERLRPGEPPTVESAKSLLDSRFFDPK
RYDLASVGRYKMNKKLHIKNRLFNQKLAETLIDPDTGEILAEEGTVIDRRVLDKLMPYLE
NNVGFDRINLQGGVINDEEVDIQSVLIYSQDPTAEEGEKIKVIANGNVPDTVKNITPADI
ISSVSYFFNLLHGVGNTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTN
VITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGF
EVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRKVNHETGIVSEKV
DYLTADEEDNYIVAQANAKLNEEGQFSDENIICRFRGENIIVPRDRVDYMDVSPKQVVSA
ATACIPFLENDDSNRALMGANMQRQAVPLLEPHSPLVGTGMEYVSAKDSGASVVAKNRGR
VEKVTAKFVDVRDLAEVDGKETEGNLKRYNFMKFERSNQGTCYNQRPIVSEGMIVDEGEI
LADGSSMEKGEMALGQNVLVGFMTWDGYNYEDAIILSERLVKDDVYTSIHIEEYESESRD
TKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDILVGKVTPKGVTELTAEERLL
HAIFGEKAREVRDTSLRAPHGGDGIVLDVKVFNREDGDELPPGVNQLVRAYIVQKRKINE
GDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAAR
QLGIHIATPVFDGAREEDVWETIEESGMARDGKTVLYDGRTGEPFDSRVSVGVMYMIKLA
HMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSD
DTIGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMDVKMLSSNDEEIDMLEHEDEE
ENTGEKLNLNLESGESNA
NT seq 3477 nt   +upstreamnt  +downstreamnt
atggatcttccgaatttaatcgagatccagacagcttcatatcaatggttcctggatgaa
ggagttcgtgaaatgtttcaggatatttcaccaatttcggatttcaccggaaacctggtt
ctcgagtttattgattactcattgggagagccaaaatatccggttgatgaatctaaggag
cgggatgtaacatactcagcgccgctgcgcgtcaaagtccgattgattaatcaggaaaca
ggagaagtgaaggaacaggaagtctttatgggtgattttccactcatgacggatacaggt
acctttgtgattaatggtgccgaacgtgtcattgtttcccagcttgttcgttctccaagt
gtttacttcaacaaaaaggtcgacaagaatggtaagaaaggtcataccgcaacggtgata
ccgaaccgtggtgcatggctcgagcttgaaactgacgcaaaagacgttgtctattgccgc
attgaccggacccgtaagatcccggcaaccgttttgctcagagcgcttggatttggtact
gatcaggaaatcatcgatcttcttggtgaagatgaatacctacgcaacacactggataag
gacaatacagattcttccgagaaagcgctccttgaaatttatgagcggcttcgtccaggg
gaaccgccaaccgtagagagtgccaagagtctcctcgattcccggttctttgacccgaaa
aggtacgatctggccagtgtcggacgctacaaaatgaacaaaaaacttcatattaagaac
cgcctctttaaccagaagcttgcagaaacattgatcgatccggatacaggagaaattctt
gctgaagaaggcaccgtgattgaccgacgtgtgctcgacaagctgatgccatacctagag
aacaatgtcggttttgaccgcattaatctgcagggcggcgtgatcaatgatgaggaagtc
gacattcagtccgtactcatctattcacaggatccaacagctgaagaaggcgagaaaatc
aaggtcattgccaacgggaatgtccctgatactgttaagaacattacaccggcagacatt
atttcttctgtcagctacttctttaacctgttgcacggtgtaggaaacaccgatgacatt
gaccacctcggtaaccggcgccttcgctctgtgggtgaactcctgcagaaccagttccgc
atcggtttatcccggatggaacgtgtcgttcgtgaacgcatgtccattcaggacaccaat
gtgatcacaccgcaggccctgatcaatatcaggcctgtgattgcctccatcaaagaattc
ttcggaagttctcagctttcccagtttatggatcagacaaatccgctggctgagctgacg
cataaacgccgtctgtctgcacttggacccggtggtttaacacgtgaacgtgccggtttt
gaagtacgtgacgtacactactcgcactacggccgtatgtgtccgattgaaacaccggaa
ggaccgaacatcgggttgattaactcgctgtcctcctatgcaaaagtgaaccgtttcggt
ttcattgaaacgccttaccgtaaggtcaatcatgaaacgggcatcgtttctgaaaaagtg
gattatctgactgcagatgaggaagataactacatcgttgcccaggcgaatgccaagttg
aacgaagaaggccagttctcagatgagaacatcatctgccgattccgcggggagaacatc
attgttcctcgggaccgggtagactacatggacgtatcgccaaagcaggttgtctctgcg
gcaacagcttgtattccgttccttgaaaacgacgactccaaccgtgccctgatgggtgcg
aacatgcagcgtcaggccgttccgcttcttgaaccgcattctccgttagtgggaaccggc
atggaatatgtatccgctaaagactccggggcatccgttgttgcgaaaaaccgcggccgg
gttgaaaaagtcaccgcgaaattcgtggatgtccgtgatcttgccgaagtggatggcaaa
gaaaccgaaggcaacctgaagcgttataatttcatgaaatttgagcgttccaaccaggga
acgtgctacaaccagcgcccgatcgtcagtgaaggcatgattgtagatgagggtgagatc
ctggcggatggttcatccatggaaaaaggagaaatggcactcggtcaaaatgtccttgtc
ggttttatgacatgggacgggtacaactatgaggatgccattattctgagcgaacgactc
gttaaggatgacgtctacacgtccattcatatcgaggaatatgaatccgaatcccgggac
acgaaactcggaccggaagaaatcacccgggacattccaaacgtgggtgaagatgcgctg
cgtaatctcgacgagcgcggaattatccgtgtcggtgcagaagtgaaagacggcgacatt
ctcgttggtaaagtgacgcctaaaggtgtgaccgaactgacagcggaagaacgtcttctt
cacgccatcttcggagaaaaagcccgtgaagtaagagacacgtctcttcgtgcaccacat
ggcggcgacgggattgtccttgacgtgaaagtctttaaccgtgaagacggtgatgaattg
ccacctggtgtgaatcagctcgtgcgggcgtatatcgttcagaagcgtaagattaacgaa
ggtgacaaaatggccggacgacacgggaacaaaggtgttatttcccgtatcctgccggaa
gaagatatgccatatcttccggacggtacgccgatcgacatcatgttgaacccgcttggg
gtaccatcgcgaatgaatatcggtcaggtccttgagctccatatgggcatggctgcaagg
cagctcggcatccacattgcaacaccggtatttgacggtgcccgagaagaagacgtttgg
gaaaccatcgaagaatccgggatggcccgtgacggaaagaccgttctctatgacggccgg
accggtgaaccgtttgacagccgggtttccgtcggtgtcatgtatatgattaaactggcg
cacatggtcgatgacaagctgcacgcccgttccacgggaccttattccctcgttacccag
cagccgcttggcggtaaggcacagtttggcggacagcgatttggtgagatggaagtatgg
gcccttgaagcatacggggcagcatatacccttcaggaaatcctcaccgtcaaatccgat
gacaccatcggacgtgtgaagacctatgaagcaatcgtcaaaggtgaaaacgtccctgaa
ccaggggttccggaatcctttaaagtattgatcaaggaacttcagagtctgggtatggat
gtgaaaatgctgtcaagcaatgacgaagaaatcgacatgctcgagcatgaagatgaagaa
gaaaataccggtgaaaagctgaacctcaacttggaatccggcgagtcgaacgcgtaa

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