KEGG   Bifidobacterium bifidum BGN4: BBB_0245Help
Entry
BBB_0245          CDS       T02135                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
bbf  Bifidobacterium bifidum BGN4
Pathway
bbf00473  D-Alanine metabolism
bbf00550  Peptidoglycan biosynthesis
bbf01100  Metabolic pathways
bbf01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:bbf00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    BBB_0245 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BBB_0245 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BBB_0245 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bbf01011]
    BBB_0245 (ddl)
Enzymes [BR:bbf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     BBB_0245 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:bbf01011]
 Precursor biosynthesis
  Amino acid ligase
   BBB_0245 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID: AFL03841
UniProt: I3WG28
LinkDB All DBs
Position
296533..297678
Genome map
AA seq 381 aa AA seqDB search
MAETAKIRVVVMYGGKADEHSISCISTAGVLRALDTDRFEPVPVGITKQGQWIVDGEDPR
GWDMADGLPVVEKTSGSRDVVLDVALGQDGFFARNDDGTLSSLGHVDAVLPVLHGPYGED
GTIQGLLEMMDVPYVGCGVLASAACMDKHYTKVLLAAAGIPVAPGITVDARGFDAASRFA
ADADGLLAQVEEAGLAYPLFVKPSRAGSSFGVTKVEHAGDAAELAAAVFEASHHDWRILI
EQGIDAREIECAVLCPKAGSEPQASWPGEIVLDKRNSGDDQFYDFDSKYMDSSASHVEVP
ANLPQETLQQVRETAVKAFKAVDGAGLSRVDTFVTPDGEVMVNEINTMPGFTPISMYPKA
WEATGIGYTDLITKLIDGVLR
NT seq 1146 nt NT seq  +upstreamnt  +downstreamnt
atggctgaaacggccaagattcgcgttgtggtgatgtatggcggcaaggccgacgagcat
tcgatttcctgcatttcgactgccggcgtgctgcgcgcgcttgacaccgaccggttcgag
ccggtgccggtgggcatcaccaagcagggccagtggatcgtggacggcgaggacccgcgc
ggatgggatatggccgacggtctgccggtcgtcgagaagacttccggctcgcgcgacgtc
gtgctggacgtggcgctcgggcaggatggcttcttcgcccgcaacgacgacggcacgctg
agctcgctggggcacgttgacgcggtgctgccggttctgcacggcccgtatggcgaggac
ggcacgattcagggtctgctggagatgatggatgtgccgtacgtcggttgcggcgtgctc
gcgtccgccgcgtgcatggacaagcattacacgaaggtgctgctggccgccgccggcatt
ccggtcgctcccggcatcaccgtggacgcgcgcggcttcgacgcggcgtcgcggttcgcc
gctgatgccgatggtctgctcgctcaggtcgaggaggccggactggcgtacccgctgttc
gtcaagccgtcccgcgccggatcgagcttcggcgtgaccaaggtggagcatgccggtgac
gccgccgagctggccgccgccgtgttcgaggcgagccatcatgattggcgaatcctgatc
gagcagggcatcgacgcgcgtgagatcgagtgcgcggtgctgtgcccgaaggccggcagt
gagccgcaggccagctggccgggcgagatcgtgctcgacaagcgcaacagcggcgacgac
cagttctacgacttcgacagcaagtacatggattcgtcggcgagccatgtggaggtgccg
gcgaatctgcctcaggagactctgcagcaggtgcgcgagaccgcggtcaaggcgttcaag
gcggtggatggcgccggcctgagccgcgtggacacgttcgtgacgccggacggcgaggtg
atggtcaatgagatcaacacgatgcccggtttcacgccgatctccatgtatccgaaggca
tgggaggcgaccggcatcggctataccgacctgatcaccaagctgatcgacggcgtgctg
cgctag

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