Bifidobacterium bifidum BGN4: BBB_1233
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Entry
BBB_1233 CDS
T02135
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbf
Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbf03032
]
BBB_1233 (gyrA)
03400 DNA repair and recombination proteins [BR:
bbf03400
]
BBB_1233 (gyrA)
Enzymes [BR:
bbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBB_1233 (gyrA)
DNA replication proteins [BR:
bbf03032
]
Prokaryotic type
DNA Topoisomerases
BBB_1233 (gyrA)
DNA repair and recombination proteins [BR:
bbf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBB_1233 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
PDDEXK_1
LRIM1_dimer
Motif
Other DBs
NCBI-ProteinID:
AFL04825
UniProt:
I3WIW2
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All DBs
Position
1456032..1458704
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AA seq
890 aa
AA seq
DB search
MAHRTTTHQAYDPRQVQEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRRI
IYQMGEMNLTPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLALVDGHGN
FGSLDDGPAASRYTEARLAPAALGMNADIDEDTVDFTPNYDNKLKEPTVLPAAIPNLLVN
GGSGIAVGMATNMATHNLGEVVAAAKHLMAHPDATLEELMRYVPGPDWPGGGIIIGRNGI
REAYETGRGTLTTRSMTHFENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLEGIS
GAIDLTDRHNGTRLVIEIKTGFDPNAVLAQLFRHTPLQDNFTMNNVALVDGRPHTMGLKE
MLQVWIDHRRIVVRRRSEFRRRKALERLHLVEGLLLAMIDIDEVIQVIRTSDDADAAKSR
LIAVFDLDDVQAQYILDLRLRRLTRMSRIELEAERDDLKRRIEELERILASAQELDRVVV
DEMDQAVAEYGTPRRTVLLDEAEDGTLTPVTPHGDDSVNAAAMKAAAAAATLSSAEADVA
AAAAARKAGEDAAAVAALQIDDEPCTVMLGASGTIARSTPAALDAWESRSTSDERTKDDH
IVSIFRTTTRSSYGLVTSAGRLVLAHVVELPALAASPQTNVAGGIPADELIGMTESTDPI
PGEHVVAAIPMDQRDDDGPTPAPLAIGTRAGVVKRWNREAPTTMDSWSVIDLKDGDSVLF
AADAADEDRLVFIASDSSLLTFDAGNVRPQGRTAGGMAGIRLAEGCTAITFNVVPAGKIA
WTYEEGDNGMFSASGAVVLTVAGDKDALPGTENGAAKVTPLEMYPTKGRGTGGVRSQRFL
KGQNTLIFARVGMYPLHASTEGGSPVELPKPDMRRDASGVDLAAPVAFCG
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcgcaccacgactcatcaggcctatgacccgcgtcaggtccaagagcatatc
gtggaaacgccgttgaacgaggaaatgagcaagtcgttcctcgaatacgcgtattcggtg
atctacgcgcgagccctgcctgacgcgcgcgacggcctcaagcccgtgcagcgccgcatc
atctaccagatgggcgagatgaacctgacgcccgaccgcccgtacatgaaatcggcccgc
gtggtgggcgaggtgatgggcaagctccacccccacggcgattcagccatctacgaggcg
atggtgcgtctcgcgcagccgttcgcgatgcgtctcgcgctggtggacggccatggcaat
ttcggctcgctggacgacggcccggccgcctcccgatacaccgaggcccgtctggcgccc
gcggcgctgggcatgaacgccgacatcgacgaggacaccgtcgatttcacgccgaactac
gacaacaagctcaaggagccgaccgtgctgccggccgcgatccccaacctgctggtcaac
ggcggttcgggcatcgctgtcggcatggccacgaacatggcgacccacaatctcggcgag
gtcgtcgcggccgcgaagcacctgatggcgcatcccgacgccacgctggaggagctcatg
cgctacgtgccgggccccgattggccgggcggcggcatcatcatcgggcgaaacggcatc
cgcgaagcgtacgagaccggccgcggcacactcaccacgcggtcgatgacgcatttcgag
aacgtgacggcgcgcaagaaggccatcgtggtcaccgagctgccgttcatggtcggcccc
gaacgggtgctggaacgcatttccgaaggggtgaagaaccgcaagctggagggaatctcc
ggcgccatcgacctgaccgaccgccataacggcaccaggctggtcatcgagatcaagacc
ggtttcgacccgaacgccgtgctcgcgcagctgttccgacacacgccgctgcaggacaat
ttcacgatgaacaacgtcgcgctggtggatggccggccccacaccatgggtctcaaggag
atgctgcaggtgtggatcgaccaccgccgcatcgtggtgcgccggcgcagcgaattccgc
cgccggaaggcgcttgagcgcctgcacctggtcgagggcctgctgctggccatgatcgac
atcgacgaggtcatccaggtcatccgcacctcggatgacgccgacgccgcgaagtcgcgg
ctgatcgcggtcttcgaccttgacgacgtgcaggcgcagtacatccttgacctgcgcctt
cgccggctcacacgcatgagccgcatcgagctggaggcggagcgcgacgacctcaagcgg
cgtatcgaggagctggagcgcatactggcctccgcgcaggaactggaccgcgtggtcgtc
gacgaaatggatcaggcggttgccgaatacgggacgcctcgccgtaccgtgctgctggac
gaggccgaggacggcacgctgacgccggtgacccctcatggagacgacagcgtgaacgcg
gccgcgatgaaggccgccgcagccgcggccaccctgtcgtcggccgaagcggacgtggcc
gccgcggccgcagcaaggaaggccggcgaggatgccgcggcagtcgcggcgctgcaaatc
gacgacgagccgtgcacggtgatgctcggcgcgtccggcacgatagcgcgctccaccccg
gccgcattggatgcctgggagtcacggtcgacgagcgacgaacgcacgaaggacgaccac
atcgtgtccatcttccgcaccaccacacggtcctcgtacgggctggtcacgtccgccggg
cgtctggtgctggcccatgtggtcgaattgcccgcgctcgccgcatcgccgcagacgaac
gtcgccggcggcataccggccgacgagctgatcggcatgaccgaaagcaccgatccgatt
cccggcgagcatgtcgtcgccgccatccccatggatcagcgcgacgacgacggcccgacc
cccgctcccctggccatcggcacacgggccggcgtggtgaaacgctggaaccgcgaggcc
cccaccacgatggactcctggagtgtcatcgacctcaaggacggcgactccgtgctgttc
gccgccgacgcggcggacgaagaccgcctcgtgttcatcgcgtccgactcctcgctgctg
acgttcgatgccgggaacgtgcgcccgcagggtcgcaccgccggcggcatggcgggaatc
cgtctggctgagggatgcacggcgatcacgttcaacgtggtgcccgcaggcaagatcgcg
tggacgtacgaagagggcgacaacggcatgttctccgcgtccggagccgtcgtgctgacg
gtcgccggagacaaggacgcgctgcccggcaccgaaaacggtgcggccaaggtgacgccg
ttggagatgtacccgaccaagggccgcggcaccggcggagtgaggtcgcagcgtttcctc
aagggccagaacaccctgatcttcgcccgcgtcggcatgtacccgctgcacgcctccacc
gagggaggctcgccggtggagctgcccaagcccgacatgcgccgcgacgcatccggtgtt
gatctggccgcgcctgtcgccttctgtggatga
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