Bifidobacterium bifidum PRL2010: BBPR_1093
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Entry
BBPR_1093 CDS
T01340
Symbol
nfo
Name
(GenBank) Nfo Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bbp
Bifidobacterium bifidum PRL2010
Pathway
bbp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBPR_1093 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbp03400
]
BBPR_1093 (nfo)
Enzymes [BR:
bbp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BBPR_1093 (nfo)
DNA repair and recombination proteins [BR:
bbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBPR_1093 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADP36159
UniProt:
A0A0H3ED32
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All DBs
Position
complement(1291275..1292126)
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AA seq
283 aa
AA seq
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MKELYIGSHLSTAGGWSALLKRSHEEHGTTFAFFPRSPYGRPSKALNPSGAVAFARQLTA
EHYGPLVVHAPYVYNLAGKDPDKREFAIRALAEDIRLLTPIRETGQEIYINIHPGAHVGQ
GPDRGCSLISDGLNRVFGLEPGIMVLLETMAGKGTECGRNFEELATIIDGVDDKANVGVT
VDTCHVLDAGYDLVNDFDGVMRQLDDVIGLERVKAVHVNDSQFGLSSHKDRHANIGDGHL
GIPFFTRMVNDPRLSRLPMILETKELTETTHREEIALLRGLVQ
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaactgtatatcggatcgcacctgtccacggcaggcgggtggagcgcgctgctg
aaacgctcgcatgaggaacacggcaccacattcgcgttcttcccgcgctcaccgtacggg
cggccatccaaggcgctcaacccgtccggggccgtcgcattcgcgcggcagttgacggcc
gagcattacggcccgctcgtcgtccacgctccctacgtctacaacctcgccggcaaggat
cccgacaagcgcgagttcgccatacgggcgctcgccgaggacatccgactgctgacgccg
atccgtgagaccgggcaggagatatacatcaacatccatcctggcgcgcacgtggggcaa
gggcccgatcgcggatgctctctgatcagcgacggcctcaaccgcgtgttcgggctggag
ccgggcatcatggtgctgctggagacgatggcgggcaagggcaccgaatgcgggcgaaac
ttcgaggagctggcgaccatcatcgacggcgtcgatgacaaggcgaacgtgggcgtcacc
gtcgacacgtgccatgtgctggacgccggttatgatctggtgaacgacttcgacggcgtg
atgcggcagctggacgacgtcatcgggctcgaacgcgtcaaggcggtgcacgtcaacgac
tcccagttcggcctgtcatcgcacaaggaccgccacgccaacatcggcgacggccacctc
ggcattccgttcttcaccagaatggtcaacgacccgcgtctgtcacggttgccgatgatc
ctcgaaaccaaggaactgaccgagaccacgcatcgcgaggagatcgccctgctgcgcggt
ctcgtgcagtga
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