KEGG   Bifidobacterium bifidum PRL2010: BBPR_1093
Entry
BBPR_1093         CDS       T01340                                 
Symbol
nfo
Name
(GenBank) Nfo Endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
bbp  Bifidobacterium bifidum PRL2010
Pathway
bbp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bbp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BBPR_1093 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbp03400]
    BBPR_1093 (nfo)
Enzymes [BR:bbp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     BBPR_1093 (nfo)
DNA repair and recombination proteins [BR:bbp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BBPR_1093 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: ADP36159
UniProt: A0A0H3ED32
LinkDB
Position
complement(1291275..1292126)
AA seq 283 aa
MKELYIGSHLSTAGGWSALLKRSHEEHGTTFAFFPRSPYGRPSKALNPSGAVAFARQLTA
EHYGPLVVHAPYVYNLAGKDPDKREFAIRALAEDIRLLTPIRETGQEIYINIHPGAHVGQ
GPDRGCSLISDGLNRVFGLEPGIMVLLETMAGKGTECGRNFEELATIIDGVDDKANVGVT
VDTCHVLDAGYDLVNDFDGVMRQLDDVIGLERVKAVHVNDSQFGLSSHKDRHANIGDGHL
GIPFFTRMVNDPRLSRLPMILETKELTETTHREEIALLRGLVQ
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaaggaactgtatatcggatcgcacctgtccacggcaggcgggtggagcgcgctgctg
aaacgctcgcatgaggaacacggcaccacattcgcgttcttcccgcgctcaccgtacggg
cggccatccaaggcgctcaacccgtccggggccgtcgcattcgcgcggcagttgacggcc
gagcattacggcccgctcgtcgtccacgctccctacgtctacaacctcgccggcaaggat
cccgacaagcgcgagttcgccatacgggcgctcgccgaggacatccgactgctgacgccg
atccgtgagaccgggcaggagatatacatcaacatccatcctggcgcgcacgtggggcaa
gggcccgatcgcggatgctctctgatcagcgacggcctcaaccgcgtgttcgggctggag
ccgggcatcatggtgctgctggagacgatggcgggcaagggcaccgaatgcgggcgaaac
ttcgaggagctggcgaccatcatcgacggcgtcgatgacaaggcgaacgtgggcgtcacc
gtcgacacgtgccatgtgctggacgccggttatgatctggtgaacgacttcgacggcgtg
atgcggcagctggacgacgtcatcgggctcgaacgcgtcaaggcggtgcacgtcaacgac
tcccagttcggcctgtcatcgcacaaggaccgccacgccaacatcggcgacggccacctc
ggcattccgttcttcaccagaatggtcaacgacccgcgtctgtcacggttgccgatgatc
ctcgaaaccaaggaactgaccgagaccacgcatcgcgaggagatcgccctgctgcgcggt
ctcgtgcagtga

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