Bordetella bronchiseptica RB50: BB3343
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Entry
BB3343 CDS
T00141
Symbol
uvrC
Name
(GenBank) putative excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BB3343 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbr03400
]
BB3343 (uvrC)
DNA repair and recombination proteins [BR:
bbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BB3343 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH_2
HHH
DRTGG
Motif
Other DBs
NCBI-ProteinID:
CAE33835
UniProt:
Q7WH66
LinkDB
All DBs
Position
complement(3569749..3571488)
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AA seq
579 aa
AA seq
DB search
MYVGKARDLKKRVSSYFQKNLASPRIAQMVAKVASVDVTVTRSEAEALLLENNLIKSLRP
RYNILFRDDKSYPYLLITGHAWPRIAYYRGATSKRGQYFGPYPNSWAVRETIQILQKVFR
LRTCEDTVFANRSRPCLLHQIGRCSAPCVGVIEAGDYAHDVQRAVRFLNGEAREVMDEIE
ARMLQASTELRFEEAAVLRDQMGSLSKVLHQQTMENVGGDDTDVIAVASAGGKICVNLAM
VRGGRHLGDKPFFPTHAEGEQPAQVLEAFVAQHYADGAMPPVLVCSHALPDSGLVGLLAE
QGGTRAARVLTRPQGVRRSWLEQAQKNAEMALARALTESGARAGRTLALAEALDLDTDEE
SLDALRIECFDISHTAGEATQASCVVFLHHDMQPSLYRRYNIVGITPGDDYAAMRQVLTR
RFGKVADGEAPMPGLVLIDGGKGQVEVARQVFVELGLDIQSLVGVAKGEGRKVGLETLVF
ADGRPPVALGKESAALMLIAQVRDEAHRFAITGMRARRAKTRNVSRLEEIEGIGARRRQR
LLARFGGLSGVSSASIEDLASVEGISQELAVRIYDALHG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcggcaaggcgcgcgatctcaagaaacgcgtatcgtcgtatttccagaagaac
ctggccagcccgcgcattgcgcagatggtggccaaggtggccagcgtggacgtcaccgtc
acgcgttcggaggccgaggcgctgctgctcgagaacaacctcatcaagagcctgcggccg
cgctacaacatcctgttccgcgacgacaagtcgtatccctatctgctgatcaccggccac
gcgtggccgcgcatcgcgtattaccgcggcgccaccagcaagcgggggcagtacttcggc
ccgtaccccaattcgtgggccgtgcgcgagaccatccagatcctgcagaaagtgtttcgc
ctgcgcacctgcgaggacacggtcttcgccaatcgctcgcgtccctgtctgctgcaccag
atcggccgctgttcggcgccgtgcgtgggcgtgatcgaggccggggactacgcccacgac
gtgcagcgcgccgtgcgctttctcaacggcgaggcgcgcgaagtcatggacgagatcgaa
gcccgcatgctgcaggcctcgaccgagctgcgcttcgaggaagcggcggtgctgcgcgac
cagatgggctcgctgtccaaggtgctgcaccagcagaccatggagaacgtcggcggcgac
gataccgatgtgatcgccgtggcgtcggccggcggcaagatctgtgtcaacctggccatg
gtgcgcggcgggcgccacctgggcgacaagccgttctttcccacgcatgccgagggcgag
cagccggcccaggtgctggaggccttcgtggcgcagcattacgccgacggcgccatgccg
cccgtgctggtctgttcgcatgcgctgcccgacagcggcctggtcggcctgctggccgag
cagggcggcacccgcgcggcccgggtgctgacccgtccgcagggcgtgcgccgctcatgg
ctggagcaggcgcagaaaaacgccgagatggcgctggcgcgggcactgaccgaatcgggc
gcgcgcgccgggcgcaccctggcgctggccgaggcgctggatctcgataccgacgaggag
tcgctcgatgccttgcgcatcgaatgcttcgatatcagccacaccgccggcgaagcgacg
caggcctcgtgcgtggtgttcctgcatcacgacatgcagccgtcgctgtatcgccgttac
aacatcgtgggcattaccccgggcgacgattatgcggcgatgcggcaggtgctgacgcgc
cgcttcggcaaggtggccgacggcgaggcgcctatgccggggctggtactgatcgacggc
ggcaagggccaggtcgaggtggcccgccaggtgttcgtcgaactcgggctggacatccag
tccctggtgggggtggccaagggggagggccgcaaggtggggctggaaaccctggtgttc
gccgacgggcggccgcccgtcgcgctgggcaaggaatcggcggccctgatgctgattgcg
caggtgcgcgacgaggcgcaccgctttgccatcaccggcatgcgcgcgcgccgcgccaag
acgcgcaatgtctcgcgcctggaagaaatcgaagggatcggggcgcgccggcgccagcgg
ctgctggcgcgctttggcggcctgtcgggcgtcagttcggccagcatcgaagacctggct
tcggtcgagggtatttcgcaggaattggccgtgcgcatctatgatgcgctgcatggctga
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