KEGG   Bordetella bronchiseptica RB50: BB4196Help
Entry
BB4196            CDS       T00141                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase B
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
bbr  Bordetella bronchiseptica RB50
Pathway
bbr00473  D-Alanine metabolism
bbr00550  Peptidoglycan biosynthesis
bbr01100  Metabolic pathways
bbr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:bbr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    BB4196 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BB4196 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BB4196 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bbr01011]
    BB4196 (ddlB)
Enzymes [BR:bbr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     BB4196 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:bbr01011]
 Precursor biosynthesis
  Amino acid ligase
   BB4196 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp TTL ATPgrasp_ST ATP-grasp_4 ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID: CAE34560
GeneDB: BB4196
UniProt: Q7WFS4
LinkDB All DBs
Position
complement(4460480..4461430)
Genome map
AA seq 316 aa AA seqDB search
MSKQFGKVGVLYGGRSAEREVSLMSGKGVHEALLSAGVDAHLFDTGERSLADLAAAGFER
VFIALHGRYGEDGTLQGALELLGIPYTGSGPLASSLSMDKIMTKRVWLQHGLPTPAFEVL
GGSTELRLVPDRLGLPLILKPPHEGSTVGITKVAGYSDMKAAYELAARFDAEVLAEQFIT
GRELTVAVLGSGAAARALPVIEIVAPGGNYDYEHKYFSDDTQYFCPADLPADVAADVAAV
AERAYAALGCEGWGRVDFILDRENRPWLLEMNTSPGMTGHSLVPMAARAVGMSYADLCVA
ILAEAACKVRSPARQD
NT seq 951 nt NT seq  +upstreamnt  +downstreamnt
atgagcaagcaattcggcaaagtcggcgtgttgtacggcggccgttcggccgagcgggaa
gtgtcgctgatgtccggcaagggcgtgcacgaagccctgctgagcgctggcgtggacgcg
cacctgttcgacaccggcgagcgcagcctggcggacctcgccgcggcgggtttcgagcgc
gtgttcatcgccctgcatggccgctatggcgaggacggcacgctgcagggagcgctggag
ctgttgggcattccttacaccggcagcgggccgctggcttccagcctgtcgatggacaag
atcatgaccaagcgggtgtggctgcagcacggcttgcccacgccggccttcgaggtgctg
ggcggcagcaccgaactgcgcctggtgcccgaccgcctgggcctgccgctgatactcaag
ccgccgcacgagggctcgaccgtcggcatcaccaaggtggcgggctattcggacatgaag
gcggcgtacgagctggctgcgcgtttcgacgccgaggtgctggccgaacagttcatcacg
ggccgcgaactgaccgtcgccgtgctgggctcgggcgccgcggcgcgcgccttgccggtg
atcgagatcgtcgcgcctggcggcaattacgactacgaacacaagtacttctcggacgac
acgcagtacttctgcccggccgacctgcccgcggacgtggccgcggacgtggccgccgtc
gccgagcgcgcctacgccgcgctaggttgcgagggttggggccgggtcgacttcatcctg
gaccgggagaaccggccctggctgctggaaatgaatacttcgcccggcatgaccggccat
tcactggtgccgatggcggcgcgcgcggtgggcatgagctatgccgacctgtgcgtggcc
atcctggccgaggccgcgtgcaaagtgcgcagcccggcgcgacaagattga

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