Bifidobacterium breve JCM 7017: B7017_0621
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Entry
B7017_0621 CDS
T03120
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bbrj
Bifidobacterium breve JCM 7017
Pathway
bbrj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B7017_0621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrj03400
]
B7017_0621
DNA repair and recombination proteins [BR:
bbrj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B7017_0621
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B7017_0621
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
RecO_N_2
T_hemolysin
Motif
Other DBs
NCBI-ProteinID:
AHJ17144
LinkDB
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Position
775251..775970
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AA seq
239 aa
AA seq
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MPLYRDEGVVLRTAKLGEADRIITLLTREHGKIRAVAKGVRRTKSRFGARLEPFMRVDLL
IAEGRSLDVVSQAESVASYGAAIAADYAAYEAANVIVETIDKLVSTEHEQLPNQYRLLIG
ALNALAKHAHASQTISESYVMRALALAGWTPRLATCVVCGKPERRYFSIASGGVMCEADH
TTDARRIAPLVLSQLDALIRGDWSVLDNAPLERIVQELVEDWGEYYLERPIRSLRLIDS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgtaccgagatgaaggcgtggtgctgagaaccgccaaacttggtgaggccgac
cgcatcatcaccctgctgacgcgcgagcatggcaagattcgagccgtggccaaaggcgta
cgacgtactaaatcacggttcggggcacgccttgaaccgttcatgcgcgtggatctgctt
attgctgagggccgttcgctggacgtcgtttcacaggctgaatccgtcgcttcgtatggt
gccgcaatagctgccgattatgcggcgtacgaggctgccaacgtcattgtggagaccatt
gataagctcgtcagcaccgagcatgagcaattgccgaaccagtatcggctgcttatcggt
gcattgaatgcgctcgccaaacatgctcatgcatcgcagaccatcagcgagtcctacgtg
atgagggccctggcgctggccggctggacgccgcgtctcgccacttgcgtggtgtgcggc
aagcccgagcgccgttacttctccatcgcatcaggcggtgtgatgtgcgaggccgaccac
accaccgatgcccgacgtatcgcgccgcttgtattgagtcagcttgatgccctgattcga
ggcgactggtcggtgcttgataacgcgccattggagcgtattgtgcaagagttggttgaa
gattggggggagtattacctcgaacggccgattcgttcgctgcgcttgatagattcatga
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