Bifidobacterium breve NCFB 2258: B2258_1726
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Entry
B2258_1726 CDS
T03122
Name
(GenBank) ATP-dependent DNA helicase recG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B2258_1726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_1726
Enzymes [BR:
bbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2258_1726
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B2258_1726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_dom3_C
AAA_30
AAA_16
SLFN-g3_helicase
SecA_DEAD
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHJ21900
LinkDB
All DBs
Position
complement(2029356..2031962)
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AA seq
868 aa
AA seq
DB search
MSITMDTALASLVPNKRRVSALKSLGVTTVGEALTYYPFRVTEPVPLRTIREAVPGQTMA
FAATIRDMRVIPMNARRGYRLEATVDDAAFARSRNIAGGLARLTFFSYRKSYVDWVSTRL
RAGTTVVVSGMPSEYMGQLQFTHPDLLTVAPAASGTVAVTGRGDPPTASTARAGGGAPYA
GASSQSAPTLKYDADTVPDALTRVCRPRPIYHASSRISSEHIHETILGLLWMMGARTSSV
PESQSMPAELVAPSIDNIAVQDGEESESKVATLAQSIPDILPKSIRAAKGLLHRAEAFLA
IHDPDSTVRFKEAIETLRYEEAFVSQASLLKARQHAHKSSAHPCLLNGDNETGAASTMDV
TNLRDRFIASLPFELTAGQHQVVEDIAADLARDWPMQRLLQGEVGSGKTVVALAAMLQVV
GAGYQAVLVAPTQVLAEQHFETIGKMVADLNVPVTLLTGGMKLAARRKALAAAASGEPGI
IVATHAAFSKTFQAPHLALVVIDEQHRFGVEQRESLNAKTDDGTTPHLLVMTATPIPRTA
AMTWFGDLDISWLTELPGGRKPIRTVVVNEADAGTMGRMFAHIRARVDAGERAYIICPRI
DTDDEDDGGVSAADSARRSRGLSTGSSGRSSRAASSRTSRASADDIGIDDPYETFDDNGE
TVVRPPLHSVAEIADRLQKLPQFAGIRFATLTGRDKDDVKTQVMADFASGKTPILVSTTV
IEVGVDVKQASCIVIFDADRYGLSQLHQLRGRVGRGGTNSWAFLISRAEPVSPAEQRLEV
IHNSLDGAEIAQADLEFRGAGDVLGDAQSGGKSSLKLLRVVKDADMIADARTRAEQLLEA
DPELAGEVQLAGAVLDFTRGNETFLTSS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaccatggacaccgcactcgcttcgttggttcctaacaagcgccgcgtgtcc
gcgctcaaatcgctgggcgtcaccactgtgggtgaagcgctcacctattatcctttccgc
gtcactgagcctgtgccgctgcgcacgattcgcgaggctgttcccggccagactatggca
ttcgctgccaccatacgggatatgcgcgtaataccaatgaacgctcgccggggttatcgt
cttgaggccacggtcgatgatgctgccttcgcccggtcgcgcaatatagctggcggtctt
gcccggctcacattcttctcctatcgcaaatcgtacgtcgattgggtgagcacgcgattg
cgtgctggcacgaccgtggtggtctccggtatgcccagcgaatatatggggcagctgcag
ttcacccatccggacttgctcaccgttgcacctgctgcatccggcacagtggcagtgacc
gggagaggagatcccccaaccgcatcgactgcgcgggcaggtggtggcgccccatacgct
ggcgcttcatctcagtccgctccgacgctcaaatacgatgccgataccgtgcccgatgcc
ctgactcgcgtctgccgtccccggccgatctaccacgccagctcacgcatctcgtccgaa
catattcacgagacgattctgggactgctgtggatgatgggtgcgcgcacatcatctgtg
cctgaaagccaaagcatgcccgccgagctcgtcgcgccctccatcgacaacatcgcggtg
caggacggcgaggaatccgagtccaaggttgccacactcgcccagtccatcccggatatt
ctgcctaaatccatacgcgcggccaagggcctgcttcacagggcggaggcgttcttggcc
attcatgacccggactccaccgtgcgattcaaagaggccattgagacgttgcgctacgag
gaggcgttcgtctctcaggcctcgctactgaaggcccgccaacatgctcataagtcgtct
gctcatccgtgcctgttgaacggcgataatgaaaccggcgcagccagcacgatggacgta
actaatttgcgtgatcggttcatcgcatccttgccatttgaactgactgctggtcagcat
caggtagttgaagatattgccgctgacttggctcgtgactggcctatgcaacgcctgttg
cagggtgaagtcggatccggcaaaaccgtggtggcgctcgccgccatgctgcaagtggtc
ggcgcggggtatcaggcggtgcttgtggctcctactcaggtgctcgccgaacagcatttt
gagactattggcaagatggtcgctgacctcaatgttcctgtcacgttgctaacgggcggc
atgaaactcgcagcccggcgtaaggctcttgctgctgcggccagtggcgagccgggcatt
atcgtggctacgcatgcggcgttctccaagacgttccaagcaccacatctggctttggtg
gtcattgatgagcagcaccgattcggtgtggaacagcgcgaaagtctcaatgccaaaacc
gatgacggcaccacgccgcatctgctggtgatgaccgcaacgcctattccgcgcaccgcc
gccatgacttggttcggcgatcttgatatttcctggctcactgagctgcctggtggccgc
aaaccgattcgtacggtggtggttaacgaagctgacgcgggcacgatggggcgtatgttc
gcgcatatccgtgcgcgtgtagatgcaggggagcgggcctatatcatctgcccgcgcatc
gatacggatgatgaagatgacggcggcgtgtcggcagcggattccgcgcggcgttcgcga
gggctttcaacgggttcaagcgggcgatccagtcgggcggcttcttcgcggacatcccgc
gcatcggccgatgacattggcattgatgatccgtatgagactttcgacgacaatggtgag
acggtagtccgcccgccgttgcactcggtagccgaaatcgcagatcgattgcagaagctc
ccgcagtttgccggcatccgtttcgccacattgaccggtcgagacaaggatgatgtcaaa
acccaagtcatggccgacttcgccagtggcaagaccccgattctggtttcgaccacggtg
atcgaggtaggtgtggacgtcaaacaggccagctgcatagttattttcgatgccgaccgg
tacggcttgtcccagttgcaccagttgcgtggtcgtgtgggccgcggcggtaccaattcg
tgggcattcctcatctcccgtgccgagccggtctcgcccgccgagcagcgccttgaggtc
atccacaattcgcttgatggggccgaaatcgcacaggccgatttggaattccgcggtgcc
ggcgacgtgctgggagatgcccaatccggtggcaagtccagtctgaagctgttgcgcgtg
gtcaaggacgccgacatgatcgccgacgctcgtacccgtgccgagcagctgctcgaagca
gaccccgaactggccggcgaagtccagcttgccggagcggtcctcgacttcacccgaggc
aacgagacgtttttgacttccagctga
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