Bifidobacterium breve NCFB 2258: B2258_1775
Help
Entry
B2258_1775 CDS
T03122
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn00300
Lysine biosynthesis
bbrn00470
D-Amino acid metabolism
bbrn01100
Metabolic pathways
bbrn01110
Biosynthesis of secondary metabolites
bbrn01120
Microbial metabolism in diverse environments
bbrn01230
Biosynthesis of amino acids
Module
bbrn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B2258_1775
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B2258_1775
Enzymes [BR:
bbrn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B2258_1775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHJ21949
LinkDB
All DBs
Position
complement(2092707..2094329)
Genome browser
AA seq
540 aa
AA seq
DB search
MPISPIWPAVTAVNANGAIAFHGRTAESLLDEFGSPLYLIDTDEVSARAKHFVRAAAEAF
NTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
DEIALAIEQGFAKIVVDEPNEPERIAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHED
QKFGVPLLAAGADAAVLDVLNNLTDVTPAATNARIAESDVNAGNDHPQSTAPIAPASGSG
KPARELRYDVKYPYDLSHEEVSDTDKVLAAAMEAIADGPSIAVLKTILANQDVLELVGAH
SHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDSMDIDVE
LTRLAGSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKDSAGNPI
GERVYVSVDGGMSDNIRPALYGADYTAHLANRTGSTETMLARVCGMHCESGDIVVHEVRL
PADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLRRQTIDDLLDLDQS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcctatttctccaatttggccggccgtcacggccgtgaatgccaatggtgccattgca
tttcatggccgcaccgccgaatccctgttggacgagtttggctcgccgctttacctcatc
gataccgatgaggtatcggcccgtgccaagcacttcgtacgcgctgcagccgaggcattc
aacacctccaccacgcacgtgagctttgccggcaaggcgttcctgtccaaggaaatcgtg
cgactggtcgccgaggctggcatgtttgtggacacctgcacgatgggggagatgcgaatc
gccctcgctgccggtgtgcccggccgccgcctagtgctgcatggcaacaacaagtccgat
gatgaaatcgcgctggccatcgaacagggcttcgccaaaatcgtggtcgatgagcctaat
gagccggagcgcatcgccgccatcgcccgtaaactcggcaagcgtgcccgcgtgatgctg
cgtgttactgtcggcgtgcatgccggtggtcacgaatacatctccaccgctcacgaggat
cagaagttcggcgtcccgctgctggcggccggagccgacgccgcagtgctcgacgtgctg
aacaacctgacggacgtgacacctgccgcgaccaacgcgcgtattgcggagtcggacgtt
aatgctggcaatgaccaccctcagtcgactgcgccgatagctcccgccagcgggagcggc
aaaccggcacgcgaactgcgttatgacgtcaagtatccgtacgacctgagccatgaggaa
gtctccgatacggataaggtacttgccgccgctatggaagccatcgcagacggtccgtcc
attgccgtgctcaagaccatcctggccaatcaggatgtgctggaactggtcggtgctcac
tcgcatatcggctccaacatccacgacgcggatgccttcatccacgccgccaagcgcatg
atgctgctgcgcaagaccctgtgggccaccgacgcctacatcctgcccgaaatcgatctc
ggcggtggttactccgtggcctacaccgacggcgaagattccatggatatcgatgtggag
ctcactcgtctggccggctcggtcagcgacacaaaccgtgctctgggcatgcccgccccg
gccatcagcttcgagcccggccgttacatcgtggctccagccggcgtgaccctgtatcgt
gtaggcaccatcaagcatgtgcacctgagcgatgccaaagacagtgccggcaacccgatt
ggcgagcgtgtgtatgtgtctgtggatggcggcatgtccgacaatatccgtccggcactg
tacggagccgattacaccgcacatttggccaaccgaaccggctctactgagacgatgctt
gcccgcgtgtgcggcatgcattgcgaatccggcgacatcgtggtccatgaggtgcgtttg
cctgctgatctcaagcgcggagacattcttgccgtgccggtcaccggtgcatacggccgc
acgatggccagcaactataaccaagcgttgattccggccgtggtcgccgtgtctgagcag
ggcgcacatgttatgttgcgccgccagaccatcgatgacctgctggacttggatcaaagc
tga
DBGET
integrated database retrieval system