Bradyrhizobium sp. BTAi1: BBta_2983
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Entry
BBta_2983 CDS
T00528
Name
(GenBank) Putative Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBta_2983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbt03400
]
BBta_2983
Enzymes [BR:
bbt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBta_2983
DNA repair and recombination proteins [BR:
bbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBta_2983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ABQ35107
RhizoBase:
BBta_2983
UniProt:
A5EG13
LinkDB
All DBs
Position
complement(3110337..3111827)
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AA seq
496 aa
AA seq
DB search
MHVVTLDSDTDFDGWRTAARALAMNDVRPADVSWRVKGAAPDLFDDQADTQLPEVPKGAF
SVPASFMELAESAILHRDPNRFTLLYRLLWRLRTNHDLMEIATDPDVAQANALARAVRRD
VHKMHAFVRFREVGREREARYVAWFEPDHHIVERAAPFFARRFADMPWSILTPEMCAHWD
GSRVSFTPGVSKAEAPSEDRLEEVWLRYYASIFNPARLKVKAMEKEMPKKYWQNLPEAKL
IQPLIAAAGRRMSAMIAEPGTAPHKPQKRIEEPAMTRKPTAPAAETSPDVAAADLETLRE
EAAACRACPLWKDATQTVFGEGPDHAPLMLVGEQPGDKEDLAGHPFVGPAGQMLDRALQE
AGIDRSKVYVTNAVKHFKFVPRGKIRLHQKPATPEIKACRQWYERELATVRPALVVALGA
TAAQSVFGKITPVTKNRGHVVDLPEGPNMIATKAMVTVHPSYLLRLPDADAKAREYELFV
KDLKIAAAALKRAHAA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgtaaccctcgacagcgacaccgatttcgacggctggcggacggcggcgcgg
gcgctggcgatgaacgacgtcaggcccgccgacgtctcctggcgtgtcaaaggcgccgcg
cccgacctgttcgacgatcaggccgatacgcagctccctgaggtgcccaagggcgcattc
tcggtgccggcgagcttcatggagctggccgaaagcgcgatcctgcaccgcgatcccaac
cgcttcaccctgctctatcggctgttgtggcgtctcaggaccaaccacgatctgatggag
atcgcgactgatcctgacgtggcgcaggcaaatgcgctggcgcgggcggtgcggcgcgac
gtccacaagatgcacgccttcgtccgcttccgcgaagtcggacgcgagcgcgaggcgcgc
tacgtcgcctggttcgagccggaccaccacatcgtggaacgcgccgcgccgttcttcgcc
cgccgcttcgccgacatgccctggtcgatcctgacgccggaaatgtgcgcccactgggac
ggcagccgcgtctccttcacacccggtgtgagcaaggccgaagcgccgtcggaagaccgg
ctcgaagaggtgtggctgcgctattacgccagcattttcaatccggcacggctgaaagtg
aaggcgatggaaaaggagatgccgaagaaatactggcagaacctgcccgaggccaagctg
atccagccgctgatcgcggccgccggcaggcgcatgtcggcaatgatcgccgagcccggc
accgcgccgcacaagccgcagaaacggattgaggagccagcaatgacgcgcaaacccacg
gcacccgctgctgagacctcacctgatgtcgccgcggccgatcttgagaccttgcgtgaa
gaagccgctgcctgccgcgcctgcccgctgtggaaggatgccacgcagaccgtgttcggc
gaaggccctgaccatgcgccgctgatgctggtcggcgagcagcccggcgacaaggaggac
ctcgctggccatcccttcgtcggcccggccggccagatgctcgaccgggcgctgcaggag
gccggcatcgaccgcagcaaggtctacgtcaccaatgcggtgaagcacttcaagttcgtc
ccccgcggcaagatccggctgcaccagaagcctgcgacgccggagatcaaggcctgccgg
caatggtacgagcgtgagctcgctacggtccgcccggccctggtggtggcgctgggcgcg
accgcggcgcaatcggtgttcggcaagatcacgccagtcaccaagaaccgcggccacgtc
gtcgacctgcccgagggtcccaacatgatcgcaaccaaggcgatggtcacggtgcatccg
tcctacctgctccggcttcctgatgccgacgccaaggcgcgggagtatgagctcttcgtc
aaggacctgaagatcgccgcggccgcgctcaagcgcgcgcatgcggcctga
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