Bradyrhizobium sp. BTAi1: BBta_6906
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Entry
BBta_6906 CDS
T00528
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBta_6906 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbt03400
]
BBta_6906 (ruvB)
Enzymes [BR:
bbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBta_6906 (ruvB)
DNA repair and recombination proteins [BR:
bbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBta_6906 (ruvB)
RecFOR pathway proteins
BBta_6906 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_3
AAA_16
nSTAND3
AAA_2
AAA_18
AAA_14
AAA_33
AAA_17
Rad17
NTPase_1
AAA_28
TsaE
RNA_helicase
NACHT
NB-ARC
MCM
AAA_24
AAA_7
ABC_tran
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ABQ38793
RhizoBase:
BBta_6906
UniProt:
A5ERJ9
LinkDB
All DBs
Position
complement(7233656..7234702)
Genome browser
AA seq
348 aa
AA seq
DB search
MKPPARMVSPERRSDDVGDTALRPQQLSEFVGQQQARANLSIFIEAARKRGEALDHVLFV
GPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPA
VEEVLYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVGATTRAGLLTNPLRDRFGIPIRL
NFYTVEELEGIVTRGARVLGVGMTADGANEIARRARGTPRIAGRLLRRVRDFASAANADA
IDRAIADHALSALEVDAAGLDAMDRRYLTTIALNYGGGPVGVETMAAALSEPRDAIEDII
EPYLIQCGYLQRTPRGRLLTSHAFRHLGMAEPSRDASQFGLFGSEDDA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcccgcgcgcatggtcagcccggagcggcgctccgacgatgtcggcgacacc
gcgctgcgtccgcagcagctctctgagttcgtcggccagcagcaggcgcgcgccaatttg
tcgatcttcatcgaggcggcgcgcaagcgcggcgaggcgctcgaccatgtgctgttcgtc
ggccctcccggtctcggcaagaccacgctggcgcagatcgtcgcgcgggagctcggcgtc
ggttttcgtgcgacgtcgggacccgtgatcgccaaggccggcgatctcgcggcgctgctc
accaatctcgaagagcgcgacgtgttgttcatcgacgagatccatcgcctgagcccggcg
gtcgaggaggtgctctatccggcgatggaggatttccagctcgacctcatcatcggcgaa
ggaccggcggcgcgctcggtcaagatcgacctggcgaagttcacgctggtgggcgcgacc
acgcgcgcaggcctgctgaccaatccgctgcgtgaccgtttcggcatcccgatccggctg
aacttctacacggtggaggagctcgagggcatcgtcacgcgcggcgcccgcgtgctcggg
gtcggcatgaccgccgacggcgccaacgagatcgcccgtcgcgcccgcggcacgccgcgc
atcgccggccgcctgctgcgccgggtccgcgacttcgcctcggcggcgaacgcggacgcg
atcgatcgcgcgattgccgatcacgcgttgagcgcgctggaggtcgacgccgccgggctc
gatgcgatggaccggcgctatctcacgaccatcgcgctgaactacggcggcggcccggtc
ggcgttgagaccatggcggcggcgctgtcggagccgcgcgacgccatcgaggacatcatc
gagccctatctcatccagtgcggctatctgcagcgcaccccgcgcggccggctcttgacc
tcacatgcgttccgtcatctcggcatggccgagcccagccgcgatgccagccagttcggc
ctgttcggcagcgaggacgatgcttaa
DBGET
integrated database retrieval system
