Bubalus bubalis (water buffalo): 102393748
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Entry
102393748 CDS
T05912
Symbol
GSDMD
Name
(RefSeq) gasdermin-D isoform X1
KO
K20917
gasdermin-D
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04613
Neutrophil extracellular trap formation
bbub04621
NOD-like receptor signaling pathway
bbub04623
Cytosolic DNA-sensing pathway
bbub05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102393748 (GSDMD)
04621 NOD-like receptor signaling pathway
102393748 (GSDMD)
04623 Cytosolic DNA-sensing pathway
102393748 (GSDMD)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102393748 (GSDMD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102393748 (GSDMD)
Transporters [BR:
bbub02000
]
Other transporters
Pores ion channels [TC:
1
]
102393748 (GSDMD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
102393748
NCBI-ProteinID:
XP_006045211
LinkDB
All DBs
Position
15:80821796..80826975
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AA seq
486 aa
AA seq
DB search
MASAFEKVVRSVVRELDHKDLTPVDSLWSSASFQPYSLLSRKPLSSRFWRPRYKCVNLSI
RDILEPDAPEPALECGRTFQFHDAMDGQLQGSVKLAAPGQGRLTGGAAVSGSSSASMDLC
TLRVAPNTWEAMHHERRLRQPEPKTLQQLRSRGDDVFVVTEVLQTQKEVEVTRTHKQEGS
GQFALPGAFCLQGKGEGHLSQKKTVTIPSGSTLAFRAAQLVIGSDWDILLFPDKKQRTFL
SLQAGRRPSSTADSHPHSCFSLASIRALSDYFQFRPDGSMEHWLATTDDYQGLQAEVKAW
AMGLEGLSKGLCGRLLGGLGQVLQDEPALQALEDSLEQGLCGGQVEPRDGPVGAILESLV
LPSGQLETELAGPVFYLLQALAVLSEAQHVLLAEVLETGTLSGTFWLVESLVEQSSPWQE
HRAVSLPPERLGNSWGSEAPAWALLEACGLEPQVGTPQVCWEPGARGCACALYACLALLL
RLSQLC
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcctttgagaaggtggtcaggagcgtggtccgggagctggaccacaaggac
ctcacccctgtggacagcctttggagctccgccagcttccagccctacagccttttgagc
aggaagcccttgagttcacgattctggagaccacgctacaagtgtgtcaacttatccatc
agggacatcctggaacccgatgcgccggagccagcgctggagtgtggccgcaccttccag
ttccatgatgcgatggacgggcagctgcagggcagcgtgaagctggcagccccaggacag
ggcaggctcacaggcggggccgcagtgtccggcagctccagcgcctcgatggacctgtgc
actctgagagtggcccccaacacctgggaagccatgcaccacgagaggcgcctgcggcag
cctgaacccaaaaccctgcagcagctgcggagtcggggggatgacgtgtttgtagtgacc
gaggtgctgcagacacagaaggaggtggaggtcacccgaacgcacaagcaggagggctca
ggccagtttgcacttccgggagccttctgcttacagggcaaaggcgagggccacctgagc
cagaagaagacggtcaccatcccctcgggcagcacccttgcatttcgggcggcccagctg
gttattggctctgactgggacatcctcctcttcccagacaagaagcaaaggaccttcctg
tcgctgcaggcaggccgcaggccctccagcactgcagacagccatccacattcgtgcttc
agcttagcctccataagggccctctctgactacttccagttccggccggatgggtccatg
gagcactggctggcaaccactgacgactaccagggcctgcaggcagaggtgaaggcctgg
gccatgggcctggagggcttgtccaaggggctatgtgggcggctgctgggtggcctgggg
caggtgctgcaggacgagccggctctgcaagccctggaggactcgctggagcaaggcctg
tgcggcggacaggtggagcctcgggacggcccggtgggcgccatccttgagtccctggtg
ctgccctctggacagctggaaacggagctcgcgggccccgtcttctatctgctgcaagca
ctagcagtgctgagtgaagcccagcacgtgctgctggctgaggtgctggagacagggacc
ctgtcagggacattttggctggtggagagccttgtggagcagagcagcccgtggcaggag
caccgggctgtgtccctgccacccgagcgcctgggcaacagctggggctcagaggcgccc
gcctgggctctgctggaggcatgcggcttggagccccaggtgggcaccccccaagtgtgc
tgggagcctggggcccgcggctgtgcatgcgcactttatgcctgcctggcgctgctgctc
aggctgagccagctctgctag
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