Bubalus bubalis (water buffalo): 102406040
Help
Entry
102406040 CDS
T05912
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04141
Protein processing in endoplasmic reticulum
bbub04210
Apoptosis
bbub04217
Necroptosis
bbub04218
Cellular senescence
bbub05010
Alzheimer disease
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102406040 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102406040 (CAPN1)
04217 Necroptosis
102406040 (CAPN1)
04218 Cellular senescence
102406040 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102406040 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
102406040 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbub01002
]
102406040 (CAPN1)
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
102406040 (CAPN1)
Peptidases and inhibitors [BR:
bbub01002
]
Cysteine peptidases
Family C2: calpain family
102406040 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
102406040
NCBI-ProteinID:
XP_025142436
EnsemblRapid:
ENSBBUG00015020855
LinkDB
All DBs
Position
5:124895527..124923066
Genome browser
AA seq
716 aa
AA seq
DB search
MAEEFITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYEQLRVHCLQRGALFRDEA
FPPVPQSLGFKDLGPNSSKTYGIKWKRPTELFSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYNIILK
ALERGSLLGCSIDISSILDMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVNLIRMRNPWGE
VEWTGAWSDGSSEWNSVDPYLREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
QRFRNWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDPDPDDYGGRESGCS
FLLALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLSNASRARSEQFI
NLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQVQANLPDEQVL
SEEEIDENFKSLFRQLAGEDMEISVKELRTILNRIISKHKDLRTTGFSLESCRSMVNLMD
RDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIEFAGFKLNKKLYEL
IITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagttcatcactccggtgtactgcaccggggtgtctgcacaagtgcagaag
cagcgggccaaggagctgggcctgggccgccatgaaaatgccatcaagtacctgggacag
gattacgagcagctgcgggttcactgcctgcaaagaggggcccttttccgtgacgaggct
ttccccccggtgccccagagcctgggcttcaaggacctgggccccaactcctccaaaacc
tatggcatcaagtggaagcgtcccacggagctgttctcaaacccccagttcattgtggat
ggagccacccgcacagacatctgccagggtgcactgggggactgttggctcctggctgcc
atcgcctcccttaccctcaatgacactctcctgcaccgagtagttccacatggccaaagc
ttccaggatggctacgctggcatcttccatttccagctgtggcagtttggtgagtgggtg
gatgtggtggtggatgacctgctgcccaccaaggacgggaagctggtgttcgtgcactct
gcccaaggcaacgagttctggagcgccctgctggagaaagcctatgccaaggtgaacggc
agctacgaggccctctcaggaggcagcacgtctgagggctttgaggacttcaccggcgga
gtcaccgagtggtacgagctgcggaaggcgcccagcgacctctacaacatcatcctcaag
gccctggagcgtggctccctgctgggctgctccatcgatatctccagcattctggacatg
gaggctgtcaccttcaagaagctggtgaagggccatgcctactctgtgaccggggccaag
caggtgaactaccagggccagatggtgaacctgatccggatgcggaacccctggggcgag
gtggagtggacaggagcctggagtgacggctcctccgagtggaacagcgtggacccttac
ctgcgggagcagctccgggtcaagatggaggatggggagttctggatgtcattccgagac
ttcatgcgtgaattcacccgcctggagatctgcaacctgacacccgacgcactcaagagc
cagaggttccgcaactggaacaccaccctgtacgagggcacctggcggcgggggagcacc
gcggggggctgccgcaactacccagccactttctgggtgaacccccaattcaagatccgg
ctggaggagacggatgacccggaccctgacgactacgggggtcgcgagtcaggctgcagc
ttcctgctcgctctcatgcagaagcaccgccgtcgggagcgccgattcggccgtgacatg
gagaccataggcttcgctgtctacgaggtccctccggagctggtgggccagccggctgtg
catctgaagcgggacttcttcctgtccaacgcctcccgggcccggtccgagcagttcatc
aacctgcgggaggtcagcacccgcttccgcctgccacccggggagtacgtggtagtgccc
tccaccttcgagcccaacaaggaaggtgattttgtgctgcgtttcttctcagagaagagc
gcagggacccaagagctggatgaccaggtccaggccaatctccccgacgagcaagtgctc
tcagaagaggagattgatgagaacttcaagtccctcttcagacaactggcaggggaggac
atggagatcagcgtcaaggagctgcggaccatcctcaacaggatcatcagcaaacacaaa
gacctgcggaccacaggcttcagcctggagtcctgccgcagcatggtcaacctcatggat
cgcgacggcaatggcaaactgggcctggtggagttcaacatcttatggaaccggatccgg
aattacctgtccatcttccggaagtttgacctggacaagtcgggcagcatgagtgcctac
gagatgcggatggccattgagtttgcaggcttcaagctcaacaagaagctgtacgagctc
attatcacccgctactcggagcccgacctggccgtggattttgacaacttcgtgtgctgc
ctggtgcggctggagaccatgttccggtttttcaaaactctggacactgatctggatgga
gtggtgacctttgacttgtttaagtggttacagctgaccatgtttgcatga
DBGET
integrated database retrieval system