Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0192
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Entry
HMPREF9228_0192 CDS
T01844
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03030
DNA replication
bbv03430
Mismatch repair
bbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9228_0192
03430 Mismatch repair
HMPREF9228_0192
03440 Homologous recombination
HMPREF9228_0192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbv03032
]
HMPREF9228_0192
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_0192
Enzymes [BR:
bbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9228_0192
DNA replication proteins [BR:
bbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9228_0192
DNA repair and recombination proteins [BR:
bbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9228_0192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
NolB
AAA_22
DNApol3-delta_C
bpMoxR
KTI12
Motif
Other DBs
NCBI-ProteinID:
AEF27921
LinkDB
All DBs
Position
240858..242009
Genome browser
AA seq
383 aa
AA seq
DB search
MSVWDSLVGQQPVIDMLSRIAQGDPSQIAQSWLICGPPGSGRSNMARAFAAALESPDHGM
SDEPTRVTQQVLAGTHPDVTVLATNKVTIGIDQVREIITTSEQMPATAPWRIIIIEDVDR
MLERTTNVLLKEIEEPAEHCIWLLCAPSAQDVLPTIRSRTRIVNLAVPSASAVAGFLTAT
TGVEPKVAQRAARLAEGHIGIAKLYATDEQVMTDRDELVVGVLNLARASDAVLLAGNLID
NAKAQAEVDASRTAADQEAEFRRINGLEPGERIPPKLRGAFNQIAKKDDLKRLTTRRTRD
VLDRALNSIASIYRDVAVLQNNAEDSVGLINLENRSAITELSVRLNRAGAVARLDEVAHA
RKRLAGNGNPLLVFESLFCALIP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatgggattcgttggtaggccagcagccagtaatcgacatgctcagccgcatc
gcgcagggagacccgagccagatcgcccagtcgtggctgatttgcggccctcccggctcc
gggcgttccaacatggcccgcgcgttcgcggcggcgctggaaagccccgaccacggcatg
agcgatgagcccacgcgcgtcacgcagcaggtactcgccggcacccacccggatgtcaca
gtgctggccaccaacaaagtgaccatcggcatcgaccaggtgcgcgagatcatcaccacc
tccgagcaaatgccagccaccgcaccatggcgcatcatcatcattgaggatgtggaccgc
atgctggagcgcaccaccaacgtgctgctgaaggagatcgaagagccggccgaacactgc
atctggctgctatgcgcgccgagcgcccaggacgtgctgcccaccatccgctcgcgcacg
cgcattgtgaatctcgccgtgccctccgcctcggcagtggccggattcctgactgccacc
acgggcgtcgagccaaaagtcgcccagcgggcggcccgtctggccgagggacacatcggc
atcgccaagttgtacgccactgacgagcaggtgatgacggatcgcgacgaattggtggtg
ggcgtactgaacctcgctcgcgcctcggacgcggtgctgctggccggcaacctcatcgac
aatgccaaggcccaggccgaggtggacgcaagccgcaccgcggccgatcaagaggcggaa
tttcgccgtatcaacggtcttgagccgggggagcggattccgccgaaactgcgcggcgcg
ttcaatcagatcgccaagaaggacgatctcaagcggctgaccacacgacgcacgcgcgat
gtgctcgaccgtgcgctcaactccatcgcctccatttaccgtgatgtggcggtcctgcag
aacaatgcggaggattcggtcgggcttatcaacctggagaatcggtcggccatcactgag
ctgtccgtgcggctgaaccgcgccggcgcggtggcccgactggacgaagtggctcacgcc
cgcaagcgacttgccggtaatggcaacccgctgctggtgtttgaatcgctcttttgcgcg
ttgattccgtga
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