Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1518
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Entry
HMPREF9228_1518 CDS
T01844
Name
(GenBank) exonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbv03019
]
HMPREF9228_1518
03009 Ribosome biogenesis [BR:
bbv03009
]
HMPREF9228_1518
Messenger RNA biogenesis [BR:
bbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF9228_1518
Ribosome biogenesis [BR:
bbv03009
]
Eukaryotic type
Pre-60S particles
RNases
HMPREF9228_1518
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEF26989
LinkDB
All DBs
Position
complement(1753639..1754289)
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AA seq
216 aa
AA seq
DB search
MVDSHDAETYSAKDSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKP
SEKAVNHMNDFVRQMHTRSGLINEWENGLSLAEAEQKVTEYVLRFTPEGVRPLLAGNTIG
SDKKFLDHYMPDLMSHLHYRSVDVSTLKELARRWYPAVYENRPPKNGGHRALADIIESLD
ELRYYRKAFMAPAPGPDEAAAKAISADIVSTSILNK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacagccatgacgcggaaacgtatagcgcgaaggactcgcgcctgatttggatc
gattgcgagatgaccggacttgacatcttcggcggcgacgaactcgtcgaggtgtccgtg
gttcccaccgactttgacctgaatgtgctggacgagggcgtggattacgtcatcaagccg
tccgagaaggccgtgaaccacatgaacgatttcgtgcgccagatgcacacccgttccggc
ctgatcaacgagtgggagaatggcctgagcctggccgaggccgagcagaaggtcaccgaa
tacgtgctgcgcttcacgccggaaggcgtgcgcccgctgctggccggcaacaccattgga
tccgacaagaagttcctcgaccactatatgccggacctcatgagtcacctgcactaccgc
agcgtggacgtgagcaccctgaaggagctcgcccgccgctggtacccggccgtctacgag
aaccgcccgccgaagaatggcggtcatcgtgctctcgccgacatcatcgaatctttggat
gagctgcgctactaccgcaaggccttcatggctccggcccccggcccggacgaggccgca
gccaaggccatctctgccgacatcgtctccaccagcatcctcaataagtag
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