Bdellovibrio bacteriovorus W: BDW_03115
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Entry
BDW_03115 CDS
T03036
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bbw
Bdellovibrio bacteriovorus W
Pathway
bbw00260
Glycine, serine and threonine metabolism
bbw00460
Cyanoamino acid metabolism
bbw00630
Glyoxylate and dicarboxylate metabolism
bbw00670
One carbon pool by folate
bbw00680
Methane metabolism
bbw01100
Metabolic pathways
bbw01110
Biosynthesis of secondary metabolites
bbw01120
Microbial metabolism in diverse environments
bbw01200
Carbon metabolism
bbw01230
Biosynthesis of amino acids
bbw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BDW_03115
09102 Energy metabolism
00680 Methane metabolism
BDW_03115
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BDW_03115
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BDW_03115
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BDW_03115
Enzymes [BR:
bbw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BDW_03115
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AHI05131
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Position
complement(642408..643652)
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AA seq
414 aa
AA seq
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MTHIDLELRKAISSEEIRQQNQVELIASENIVSRNVREAQGSILTNKYAEGYPGKRYYGG
CEAVDLVENLAIERICKLFGAKFANVQPHSGVNANLATIFALIKPGDKIMGLDLSCGGHL
THGSPVNFTGQWFEVASYFVDKESELIDYDDMAKRAREQKPRFIFAGGSAYPRVIDFKRM
REIADEVGAYLVADIAHYAGLIVTGLYPNPVPYAHVVTSTTHKTLRGPRGGIILTNDADI
AKKINKAVFPGTQGGPLMHVIAAKAAAFHEALQPSFTHYSRQIIRNAKQLAMTLEEGGLR
LVTGGTDCHLVLVDLRPFGINGKDAVLALENYRLTANKNTVPFDTLSPTITSGIRFGTPA
GTTRGFKNEDFFEVGKIILDILNRLKDGKGDDPRIHKRVSELIAKYPIHGGNHE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgactcatatcgatctggagcttcgcaaagcaatatcctcggaagaaatacgtcaacaa
aaccaagtagaacttatcgcctcagaaaatattgttagtcggaatgtgcgggaagcacag
ggttctatactcacaaataaatatgcggaaggttatcctgggaaacgctactatggtggt
tgcgaagccgttgacctcgttgagaatctggcgattgaaagaatttgcaaactctttggc
gctaagtttgcaaacgttcaacctcactctggggttaacgccaatcttgcaactatcttc
gctcttattaagcccggtgataaaatcatgggactagatctttcgtgcggagggcatctt
actcatggctctcctgttaacttcaccggacagtggtttgaagttgcctcctattttgtc
gataaggaatctgagcttatagattatgatgatatggccaagagagctcgtgaacagaag
ccccggtttatttttgcaggaggctccgcctatccacgcgttattgatttcaaacgaatg
cgagaaattgccgacgaggtgggagcctacttagttgctgatatcgctcactatgctggc
cttattgtgacaggtctttatcctaacccggtcccctatgctcatgtagtaacctcgacg
actcacaaaactctcagaggccctcgcggagggatcatattaaccaacgatgccgacatc
gcaaaaaaaattaacaaagcggttttccctggaacccaaggcggtccattaatgcacgtc
atcgcagccaaagcagctgcatttcacgaagcactgcaaccatctttcactcattactca
cgtcaaattattcgaaatgcgaaacagttagccatgacccttgaagagggaggtttacgc
ctagttactggaggaacagactgtcaccttgttcttgtggatctccgaccatttggaata
aatggcaaagacgccgttcttgctttagagaactatcgcctcactgcaaataaaaacacg
gttccttttgatactctctcgccgacaatcacttcaggcatccgctttggcacacctgcg
ggcacaaccagaggtttcaaaaacgaagatttttttgaagttggaaaaattattctcgac
atcctcaatcgtcttaaagatggcaaaggagacgacccgaggatacacaaaagagtttct
gagctgatcgcaaaatatccaatccatggaggcaatcatgaatga
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