Bdellovibrio bacteriovorus W: BDW_08590
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Entry
BDW_08590 CDS
T03036
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
bbw
Bdellovibrio bacteriovorus W
Pathway
bbw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BDW_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbw03400
]
BDW_08590
DNA repair and recombination proteins [BR:
bbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BDW_08590
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AHI06218
LinkDB
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Position
complement(1796130..1798022)
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AA seq
630 aa
AA seq
DB search
MASSSFEELRDRVKEFPQQSGVYLMKGHADKIIYIGKAKNLRSRVRSYFTDSKDHSPKTR
LLVKNILEVEYILTKTEVEAFLLEASLIKKHRPKYNIRLRDDKAYPYIRFSWGDDFPRLY
LARKVKKDGALYFGPYTSGYAVQGTIRFLNRTFKIRDCTDMVFKTRTRPCMTHQIGRCTA
PCVSYISKEQYREELEGARLFLKGQNKKVVKALTERMMGAAEEEKFEVAARLRDSISAVK
AILEKQAVINDTSEKDQDAVGFYGDERGCLIETVHIRSGRVIGTRPHFLPHIDPNSFTED
PREWLVDFLNQYYDDNFIPDEVLLALDIGNDMSKLMAEVLKERSGNKVSVRFATDERGRN
LVAMANDNAQAHFEKYVSKSEEKIRGLEEIQAKLHLPEFPRRIECYDISTFQGAETVASQ
VVFEEGVPSKDNYRRYKIKTVQGVDDFASMYEVLSRRFKHFEYEDPQLIVIDGGKGQLSQ
AIKILEEIGRQDIPVVGLAKARTERDFQAQEVHSTEERFFLPGRANPVTFKSNSEALHIL
TGIRDEAHRFAITYHRKLRENTSLESELDYVVGLGEKRKKLLLTRFNSIDEIKGASAEEI
AQIKTFNRVLAERVLLQLNDLEEEESEVEE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagtagttttgaggaactcagagacagagtgaaagaattcccgcagcaaagc
ggggtctatctgatgaaaggtcatgcggataagattatctatattggcaaggctaagaac
ttacgcagccgcgtgcgcagttatttcacggatagcaaagatcattctccaaagacgcgt
cttttagtcaaaaatattttagaggttgaatacattctaacaaaaactgaagtcgaagcg
tttttgttagaggcctctttaattaaaaagcaccgccctaaatataatatccgcctgcgt
gatgataaggcctatccttatattcgtttctcatggggggatgactttcctcgactgtac
ttggcgcgcaaagtgaaaaaagatggagccttatattttggtccctacacttcaggctat
gcggtccagggaacgatccgctttttaaataggacatttaaaattcgtgattgcacggat
atggtttttaaaacccgtacacgtccttgcatgactcatcaaattggtagatgcacggcc
ccttgtgtgagctatatttcaaaagaacaatatcgtgaagaacttgaaggcgcgcggttg
tttcttaaagggcaaaataaaaaagttgttaaagcactcactgaaagaatgatgggggct
gctgaagaagaaaaatttgaagtcgctgcaagattgcgagattcaatttcagcagtgaag
gctattttagaaaaacaagccgtcatcaacgacacgtcagaaaaagatcaagatgcggtg
ggcttttacggagacgaacggggctgcctgatcgagaccgtgcatattcgttcagggaga
gtgattggcacaaggcctcacttcttgccacatattgatcccaatagctttacagaagat
cctcgtgagtggctcgtggactttttaaatcaatactatgatgacaacttcattcctgat
gaggtgcttttagcattagatattgggaacgatatgtcgaagctcatggccgaggtttta
aaagagcgttcgggaaacaaagtcagtgtgcgatttgcaaccgatgagcgtggtcgtaac
ttagtagccatggctaacgacaacgctcaagcccactttgaaaagtatgtttcaaaatca
gaagaaaaaattcgtggtcttgaagagattcaagccaagcttcatctgccagagtttcct
cggcgcatagagtgttatgatatctccaccttccaaggagctgagaccgtggcgtctcag
gtggtctttgaagaaggggttccgtctaaagataactatcgacgttacaaaataaagaca
gtgcagggggttgatgactttgcctctatgtacgaggttctaagtcgacgctttaaacac
tttgagtatgaggatcctcagttgattgtaatcgatggtgggaaaggacagctcagtcag
gcgattaagattttagaagaaatcggtcgtcaggacattcccgtagtggggctagcgaag
gcacgaacggaaagagactttcaggctcaagaggttcattccaccgaagaaagattcttc
cttccagggcgagctaatcccgtgacatttaagtccaattcagaggctttgcacattttg
acggggattcgtgatgaagcccatcgttttgccattacgtatcatcgcaagcttcgagaa
aatacatctttagagagtgaattggattatgtcgtggggcttggagagaaaagaaaaaaa
cttcttttgactcgatttaactctattgatgaaataaagggcgctagtgcagaggaaatc
gcgcagatcaagactttcaatcgagttttggcagaacgtgtgcttttgcaattaaacgat
cttgaagaagaagagtccgaggttgaagagtga
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