Bordetella bronchiseptica S798: BBS798_3588
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Entry
BBS798_3588 CDS
T03637
Name
(GenBank) bacteriophage-related DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbx
Bordetella bronchiseptica S798
Pathway
bbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBS798_3588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbx03400
]
BBS798_3588
Enzymes [BR:
bbx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBS798_3588
DNA repair and recombination proteins [BR:
bbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBS798_3588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAO70313
LinkDB
All DBs
Position
complement(3884486..3885214)
Genome browser
AA seq
242 aa
AA seq
DB search
MATAEAVRPAAATPRADGPAASPARAPRPPVAAPQRAEPAAEADGQAARAAVAARAAGAD
LGQLQQLVQDCAACGLCQGRRHAVFGMGAQPARWMVVGEAPGEQEDRQGLPFVGRSGKLL
DAMLQSVGMSRERDVFIANVIKCRPPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGR
FAAQTLLGTEATIGNLRGRVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAA
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacggccgaggccgtccggccggcggccgcgaccccacgcgccgatggcccggcg
gccagtccggcccgcgcgccgcgcccgccggtggccgcgccgcagcgcgccgagccggcc
gccgaggccgacggacaggccgcgcgggccgccgtggcggcgcgggctgccggcgccgac
ttggggcaattgcagcagctggtgcaggactgcgccgcctgcggcctgtgccaggggcgg
cgccacgccgtgttcggcatgggcgcccagcccgcgcgctggatggtggtgggcgaggcg
cccggcgagcaggaagaccgccaggggctgccattcgtcggccgctcgggaaagctgctg
gatgcgatgctgcagtcggtgggcatgagccgcgagcgcgacgtgttcatcgccaacgtc
atcaagtgccgcccgcccggcaaccgcaatcccaagcccgaggaaatcgccgcctgcagt
ccctacctgcggcgccagattgccctgctgaacccggagcgcatcctggtgctgggccgg
ttcgcggcccagacgctgctgggcaccgaggccacgataggcaatttgcgcggccgcgtg
cacagcctgcaaaccgacgaggggcgctcgattcccgtggtggtcagctaccacccggcc
tatctgttgcgcagcccggccgagaaggcgcgcgcctggcaggacctgctgctggcggcg
cgcggctga
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