Paraburkholderia caribensis: K788_0003414
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Entry
K788_0003414 CDS
T04141
Name
(GenBank) 3'-to-5' oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcai03019
]
K788_0003414
03009 Ribosome biogenesis [BR:
bcai03009
]
K788_0003414
Messenger RNA biogenesis [BR:
bcai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K788_0003414
Ribosome biogenesis [BR:
bcai03009
]
Eukaryotic type
Pre-60S particles
RNases
K788_0003414
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
ALL66000
UniProt:
A0A0P0RC88
LinkDB
All DBs
Position
1:complement(3407142..3407774)
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AA seq
210 aa
AA seq
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MTDIIESVDQPLVRSDMNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDRLVEGPVLAIH
QSDETLGKMDDWNKNTHGRSGLIDRVRASTVTEADATGQIRAFLGQHVPPGKSPMCGNSI
CQDRRFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESID
ELRYYREHFLIPAASTANAADAPSSDASAK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgactgacattatcgaatccgtcgatcagccgctcgtgcgcagcgacatgaatctcgtc
tggctggacatggaaatgacggggctcgatcccgacaatgaccgcatcatcgaaatcgcc
gtggtcgtgacgaattcgacgctcgacaggctggttgaaggccccgtgctcgccattcat
cagagcgacgaaacgctcggcaagatggacgactggaacaagaacacgcatggccgttcc
gggctgatcgaccgcgtgcgcgcgtcgacggtgacggaagccgacgccaccgggcagatc
cgcgcgttcctcggccagcacgttccgcccggcaagtcgccgatgtgcggcaactcgatc
tgccaggaccgccgtttcatggcgcgctggatgcccgaactggagacgtttttccattac
cgcaaccttgacgtcagcacgctgaaggaactgtgccgccgctggcagcccgcgatctac
aagggcttccagaagcgcgcgatgcacaccgcactcgccgacatccacgaatcgatcgac
gaactgcgctactatcgcgagcatttcctgatcccggcggcgagcaccgcgaacgcggcg
gacgcgccgtctagcgacgccagcgcgaaataa
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