KEGG   Paraburkholderia caribensis: K788_0003414
Entry
K788_0003414      CDS       T04141                                 
Name
(GenBank) 3'-to-5' oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bcai  Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcai03019]
    K788_0003414
   03009 Ribosome biogenesis [BR:bcai03009]
    K788_0003414
Messenger RNA biogenesis [BR:bcai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K788_0003414
Ribosome biogenesis [BR:bcai03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    K788_0003414
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L10
Other DBs
NCBI-ProteinID: ALL66000
UniProt: A0A0P0RC88
LinkDB
Position
1:complement(3407142..3407774)
AA seq 210 aa
MTDIIESVDQPLVRSDMNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDRLVEGPVLAIH
QSDETLGKMDDWNKNTHGRSGLIDRVRASTVTEADATGQIRAFLGQHVPPGKSPMCGNSI
CQDRRFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESID
ELRYYREHFLIPAASTANAADAPSSDASAK
NT seq 633 nt   +upstreamnt  +downstreamnt
atgactgacattatcgaatccgtcgatcagccgctcgtgcgcagcgacatgaatctcgtc
tggctggacatggaaatgacggggctcgatcccgacaatgaccgcatcatcgaaatcgcc
gtggtcgtgacgaattcgacgctcgacaggctggttgaaggccccgtgctcgccattcat
cagagcgacgaaacgctcggcaagatggacgactggaacaagaacacgcatggccgttcc
gggctgatcgaccgcgtgcgcgcgtcgacggtgacggaagccgacgccaccgggcagatc
cgcgcgttcctcggccagcacgttccgcccggcaagtcgccgatgtgcggcaactcgatc
tgccaggaccgccgtttcatggcgcgctggatgcccgaactggagacgtttttccattac
cgcaaccttgacgtcagcacgctgaaggaactgtgccgccgctggcagcccgcgatctac
aagggcttccagaagcgcgcgatgcacaccgcactcgccgacatccacgaatcgatcgac
gaactgcgctactatcgcgagcatttcctgatcccggcggcgagcaccgcgaacgcggcg
gacgcgccgtctagcgacgccagcgcgaaataa

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