Paraburkholderia caribensis: K788_0003706
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Entry
K788_0003706 CDS
T04141
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K788_0003706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0003706
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
K788_0003706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Rad17
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ALL65592
UniProt:
A0A0P0RB88
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All DBs
Position
1:2961168..2963798
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AA seq
876 aa
AA seq
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MMQQYLRIKGEHPGTLVFYRMGDFYELFFDDAEKAARLLDLTLTQRGASGGNPIKMAGVP
HHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDAALLSDKNDTY
LLAACAGHNRRGVVTTIGLAWLNLASGALRLAEVAPDQVAAALERIRPAEILVADAPSSN
DANAWTVPAGFGATTRVPVWHFDVASGTQRLCDQLEVAGLDGFGAHSLSSACGAAGALLL
YAAATQGQQLRHVRSLKVEYESEYIGLDPSTRRNLELTETLRGTDSPTLCSLLDTCCTTM
GSRLLRHWLHHPPRDASFAQARQQAIGALLDAPPQASLDGLRSALRQISDIERITGRLAL
LSARPRDLSSLRDTFIALPELRAQLAAVTAAADSLAHIDTALVPPADCVDLLKRAVAQEP
AAMVRDGGVIARGYDAELDELRDISENCGQFLIDLETRERARTGIGNLRVEYNKVHGFYI
EVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALSREKALYDALLQSL
LPFIADCQRVALALAELDLLAAFAERARALDWVAPSFTPTGGIDIEQGRHPVVEAQVEQF
IANDCVLNPERKLLLITGPNMGGKSTFMRQTALIALMAYVGSYVPARRASFGPIDRIFTR
IGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLL
AHNNCHTLFATHYFELTQLPAEFPHAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVA
QLAGVPNAVIRAARKHLAYLEQQSAAQPAPQLDLFAAPLAVLEDADDEPPAPAIDPATQA
LVERLREIDPNDLRPRDALDLLFELHELAKSPDARH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagtatttgcgcattaaaggggagcatccgggcacgctcgtgttctaccgg
atgggcgacttctatgaactgttcttcgacgacgccgaaaaggccgcgcgcctgctcgat
ctgacgctcacgcagcgcggcgcgtcgggcggcaatccgatcaagatggcgggcgtgccg
catcacgccgtcgaacagtatctggcgaagctcgtcaaactcggtgaatcggtcgcgatc
tgcgagcagattggcgatcccgcgacatcgaagggccccgtcgagcgcaaggtcgtgcgc
gtggtgacgcctggcacgctgacggatgccgcgctgctatccgacaagaacgacacttat
ctgcttgccgcgtgcgcaggccacaaccggcgcggcgtcgtgaccacgatcggccttgca
tggctcaatctggcaagcggcgcgctgcgcctcgcggaagtcgcgcccgatcaggtcgca
gccgccctcgaacgcatccgccctgctgaaattctcgttgccgacgcgccgtcgtcgaac
gatgcgaacgcgtggacagtgcccgccggtttcggcgcgacgacgcgcgtgcccgtctgg
cacttcgacgtcgcctcgggcacgcagcggctgtgcgatcaactggaagtggcgggcctc
gatggcttcggcgcgcattcgctgtcgagcgcgtgtggcgcggcgggcgcgctgctgctg
tacgcggcggcgacccagggccagcagttgcgccatgtgcgcagtctgaaagtcgaatac
gaatcggagtacatcggcctcgatccgtccacgcgccgcaatctcgaactgacggaaaca
ctgcgcggcacggactcgcccacgctctgctcgctgctcgatacctgctgcacgaccatg
ggcagccgtctgctgcgtcactggctgcaccacccgccacgcgacgcctcgttcgcgcag
gcacgtcagcaggcgatcggcgcactgctcgacgcgccgccgcaagccagcctcgacggg
ctgcgcagcgcgctgcggcaaatctcggatatcgaacggatcaccgggcggctcgcgttg
ctgtcggcacgtccgcgcgatctgtcgagcctgcgcgacacgttcattgcgctgcccgaa
ctgcgcgcgcaactcgccgccgtgacggccgctgccgattcactcgcgcacatcgatacg
gcgctcgtgccgcccgctgactgcgttgacctgctgaagcgcgcggtcgcccaggaaccc
gctgcaatggtgcgcgacggcggcgtgatcgcgcgcggctacgatgcggaactcgatgaa
ctacgagatatttcggagaactgcggacagttcctgatcgatctcgaaacgcgtgaacgt
gcgcgcacgggcatcggcaatctgcgcgtcgaatacaacaaggtgcatggcttctatatc
gaagtgacgcgcggccagacggacaaggtgcccgacgactatcgccgccgtcagacgctg
aagaacgccgagcgctacatcacgcccgagctgaaaaccttcgaggacaaggcgctgtcc
gcgcaggaacgcgcactctcgcgcgagaaagcgctgtatgacgcgctgctgcaatcgttg
ctgccgtttatcgccgactgccagcgcgttgcgttggcgctcgccgaactcgatctgctc
gccgcctttgccgagcgcgcccgcgcgctcgactgggttgcgccgagcttcacgccgacg
ggcggtatcgatatcgaacagggccggcaccccgtggtcgaagcgcaggtcgagcagttc
atcgccaacgactgcgtgctcaaccccgaacgcaagctgctgttgatcaccggcccgaac
atgggcggtaaatcgacgttcatgcgtcagaccgcgctgatcgcgctgatggcctacgtg
ggcagctatgtgcccgcgcggcgcgcgtcgtttgggccgatcgaccgcattttcacccgc
attggcgcggccgacgacctggcaggcggccgctccaccttcatggtcgagatgacggaa
gccgccgccatcctgaacgacgcgacgccgcaaagcctcgtgctgatggacgaaatcggg
cgcggcacgtcgaccttcgacggcctcgcgctcgcgtgggcgatcgcgcggcatctgctt
gcgcacaacaactgccacacgctgttcgcaacgcactatttcgaactgacgcaactgcct
gccgaatttccccatgcggcgaacgtgcatctgtcggcagtcgagcatgggcacggcatc
gtattcctgcacgccgtcaacgaaggtcccgcgaaccagagctacggcctgcaggtcgcg
caactggcgggcgtgccgaacgcggtgattcgcgcggcgcgcaagcacctcgcttatctg
gagcagcagtcggcggcgcagcccgcgccgcaactcgatctgttcgcggcgccccttgcg
gtgctcgaagatgccgacgacgagccgcccgcgccggcaatcgatcccgccacgcaggcg
ctcgtcgaacgcctgcgcgagatcgacccgaacgacctgcgcccgcgcgacgcgctcgac
ctgctgttcgaactgcatgaactggccaagtcgccagatgcgcgacactga
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