Bartonella clarridgeiae: BARCL_0191
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Entry
BARCL_0191 CDS
T01394
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcd
Bartonella clarridgeiae
Pathway
bcd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BARCL_0191 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcd03400
]
BARCL_0191 (mutM)
Enzymes [BR:
bcd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BARCL_0191 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BARCL_0191 (mutM)
DNA repair and recombination proteins [BR:
bcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BARCL_0191 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CBI75872
UniProt:
E6YG84
LinkDB
All DBs
Position
211282..212157
Genome browser
AA seq
291 aa
AA seq
DB search
MPELPEVETIRRGLNPFLTGAKIISVKLNRKNLRFPFPEAFSERLVGRTIVKLGRRAKYL
LFYLSRNETILSHLGMSGSWRIEGEFLKKEHSSVSKLVAHDHCIINVQAKDDRIYRLTYN
DVRRFGFMLLTDTRKLYEHPLLKRLGVEPMKNTLSGAYLKKAFVNKKTSLKTALLDQSIV
AGLGNIYVCEALWRSHLSPQRSAFTLALEDLCMLESANFLAQNICDVITEAIVAGGTSLR
DYMHADGSLGYFQHYFSVYGREGKECLNCEIPIVRILQSGRSSFYCPQCQK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcctgaagtagaaacaattcgccgtggacttaatccctttttaactggt
gcaaaaattatatctgttaaacttaatcgtaaaaatttgcgttttccttttccagaagca
ttttctgagcgattggtgggcagaacgatcgtaaaacttggtcgtcgtgccaaatattta
ttattctatctttcacgcaatgaaacgattttgagtcatttaggtatgtcaggatcgtgg
cgtatagaaggtgaatttttaaaaaaagagcattcttctgtaagcaaattagttgcgcat
gatcattgtattataaatgttcaggcaaaagatgatagaatttatcgtctcacttataat
gatgttcgccgttttggttttatgcttttaacagatacaagaaagctttatgaacatcca
cttttaaagaggctaggggttgagcctatgaaaaatacgctttctggcgcttatttgaaa
aaagcttttgttaataaaaaaacgtctcttaaaactgctttgcttgatcagtctattgtt
gctggtcttggaaatatttatgtttgtgaagcactttggcgtagtcacttatcaccacag
cgtagtgcatttacattggcattagaagatttatgtatgctagaatctgcaaattttctt
gcacaaaatatatgtgatgtgatcactgaagcgattgtcgcggggggaacttctttacgt
gattatatgcatgcagatgggtcacttgggtattttcaacactatttttcagtttatgga
cgtgaaggaaaagaatgtttgaattgtgagatacctattgtgcgtattttacagtcagga
cgttcaagcttttattgtccacaatgtcaaaaatga
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