Burkholderia cepacia DDS 7H-2: DM42_1687
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Entry
DM42_1687 CDS
T03302
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bced03016
]
DM42_1687 (gidA)
03036 Chromosome and associated proteins [BR:
bced03036
]
DM42_1687 (gidA)
Transfer RNA biogenesis [BR:
bced03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DM42_1687 (gidA)
Prokaryotic type
DM42_1687 (gidA)
Chromosome and associated proteins [BR:
bced03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
DM42_1687 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
DAO
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AIO49019
LinkDB
All DBs
Position
1:complement(1840176..1842146)
Genome browser
AA seq
656 aa
AA seq
DB search
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLV
KEVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL
FQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA
VSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKLDEQPGDLDPIPVFSFLGRAEQHPQQ
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP
EGLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLET
KAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKEAWCPRRDQAYLGVLVDDLVT
RGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDARWDAFSRKRDAVSRETER
LKSTWVTPKTLPAEEATALLGKAIDHEYSLAELLRRPGVSYDGVCGLKGGECGPAEPLTD
DPVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKL
NEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGTAAEAAEQGGGTVPTQQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcccacagaatttgacgtcatcgtcgtcggtggcggtcatgccggcacggaa
gccgcgctggcgtccgcccgcatgggcgcaaagacactgctgctgacccacaacatcgaa
acgcttgggcagatgagctgcaatccgtcgatcggcggcattggcaagggccatctggtc
aaggaagtcgacgcactgggcggcgcaatggctgccgcgacggatgaaagcggtattcag
ttccggatcctcaattcatcgaagggcccggccgtacgcgcgacccgcgcacaggcggat
cgcatcctgtacaaggccgcaatccgccatcggctcgaaaatcagccgaacctatggctg
ttccaacaggccgtcgacgacctgatggtcgaaggcgaccgcgtggttggcgccgtcacg
cagatcggcatccgctttcgcgcgcgcgcggtcgtgctgacggccggtacgttcctcgac
ggcaagatccacgtcggcctgaacaactacacgggcggccgcgcgggtgatccggcggcc
gtgtcgctgtcgtcgcgcctgaaggagctgaagctgccgcagggccgcctgaagaccggt
acgccgccgcgtatcgacgggcgcacgatcgacttctcgaagctcgacgagcagccgggc
gacctcgatccgatccccgtgttctcgttcctgggccgcgcggagcagcatccgcagcag
ctgccgtgctgggtcacgcatacgaacgagcgcacgcacgacatcattcgaggcggtctc
gaccgttcgcctatgtatacaggcgtgatcgaaggtgtcgggccgcgctattgcccgtcg
atcgaggacaaaatccaccggttcgcatcgaaggaatcgcaccagatcttcctggaaccg
gaagggctgacgaccaacgagttctacccgaacgggatctcgacgagcctgccgttcgat
gtccagctcgagctcgtgcattcgatgcgcggcctcgagaacgcgcacatcctgcgtccc
ggctacgcgatcgagtatgactacttcgacccgcgcgcgctgaaggcgtcgctcgagacg
aaggcgatcaacgggctgttctttgcgggccagatcaacggcacgaccggctacgaagag
gcggccgcgcagggtctgctggccggcctcaatgcaggccgttacgtgcaggagaaggag
gcatggtgcccgcggcgcgaccaggcctatctgggcgtgctggtcgacgatctcgttacg
cgcggtgtggccgagccgtaccggatgttcacgagtcgcgccgagtatcgcctgagcctg
cgcgaagataatgccgacatgcgcttgaccgaaatcggccgcgaactggggctggtcgac
gacgcgcgctgggacgccttcagccggaaacgcgacgctgtttcacgtgaaaccgaacgc
ctgaagtcgacctgggtcacgccgaagacgctgccggcagaagaggcgaccgcgttgctc
ggcaaggcgatcgatcacgaatacagcctcgccgagctgctgcgccgcccgggtgtgagc
tacgacggcgtatgcggactgaagggcggcgagtgcggccccgcggagccgctgacggac
gatccggtgctgctcgaacagatcaaggaacaggtcgagatcggcatcaagtatcagggc
tatatcgagcgccaggcgtccgaaatcgagcgcaacgatgcgaacgagaacacgcgcctg
ccggacggtatcgattaccgtgaagtccgcggcctgtcgttcgaggtgagccagaagctc
aacgagttccggccggaaacgatcgggcaagcgtcgcgtatctcgggcgtcacgccggcg
gccatctcgctgctgatggtgcacctgaagcggcgcggcctgggccgccgcaacggcacg
gccgcagaggccgcggagcaggggggcggtaccgtcccgacgcaacaatga
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