KEGG   Burkholderia cepacia DDS 7H-2: DM42_3273
Entry
DM42_3273         CDS       T03302                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bced  Burkholderia cepacia DDS 7H-2
Pathway
bced03030  DNA replication
bced03430  Mismatch repair
bced03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bced00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DM42_3273 (dnaX)
   03430 Mismatch repair
    DM42_3273 (dnaX)
   03440 Homologous recombination
    DM42_3273 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bced03032]
    DM42_3273 (dnaX)
   03400 DNA repair and recombination proteins [BR:bced03400]
    DM42_3273 (dnaX)
Enzymes [BR:bced01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DM42_3273 (dnaX)
DNA replication proteins [BR:bced03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DM42_3273 (dnaX)
DNA repair and recombination proteins [BR:bced03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DM42_3273 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_14 AAA_22 DUF3646 AAA_5 AAA_assoc_2 AAA_30 TsaE AAA_18 Mg_chelatase AAA_2 AAA_24 Glyco_tranf_2_5 nSTAND3
Other DBs
NCBI-ProteinID: AIO48704
LinkDB
Position
1:3530780..3533143
AA seq 787 aa
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEERITFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTESAVSGM
LGALDQTYMVRLLDALAAGNGPEILAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG
SVLDEWPEAADLRRFAETLSPEQVQLFYQIATVGRAELGLAPDEYAGFTMTLLRMLAFEP
AVGAGSAPGGQPSVPPRAVPAPRATAAPAAAAAKPVSAAPASAARPPAATPAAPVARSAP
VQSSDEAERPAAKPAAVQSPAEAAPEPVAADVQAVEPPQPETKAAPVGDTPPPARKEPEP
PAVAVVQRNDEPAPQAEPAPRVASPEPAAARPAARAGGAAAALDVLRNAGMRVSSDRGRA
GAAAKPAAAQPAAEKPVAPRPAVQVPTPRAAARAPQAADSRQPSPPWEDIPPDDYVPLSA
DEMFGGSDDGFVPVFDSGPDDVRVTPKPADARPAAPIDTRPLPPAIALDPIGFDGEWPAL
AARLPLKGVAYQLAFNSELTAVDATALKLSVPVPQYADAAQVAKLKAALADALGKPVEVT
VEVGPARRTAAALDAAARAARQREAEQEIHGDPFVQQLVREFGARIVEGSVRPLADSAPD
GAPPTLH
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtctccatcacgcc
tatctgtttaccggaacccgcggtgtcggcaagacgacgctgtcgcggatcttcgcgaag
gcgctcaactgtgaaaccggcgtcacgtcgcagccgtgcggcgtgtgtcgcgcgtgtcgc
gagatcgacgagggtcgtttcgtcgattacgtcgagatggacgcggcgagcaaccgcggc
gtcgacgaaatggccgcgctgctcgagcgcgcggtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaatcacgcgttcaacgcgatgctg
aagacgctggaagagccgccgccgcacgtcaagttcatcctcgcgacgaccgatccgcag
aaaatccccgtcaccgtgctgtcgcgctgtctgcagttcaacctgaagcagatgccggcc
gggcacatcgtgtcgcatctcgagcggatcctcggcgaagaacggatcacgttcgagccg
caggcgctgcgcctgctcgcgcgggccgctcagggcagcatgcgcgacgcgctgtcgctg
accgaccaggcgatcgcctattcggcgaacgaggtgaccgagtcggcggtgtcgggcatg
ctcggcgcgctcgaccagacctacatggtgcgcctgctcgacgcgctcgcggccggcaac
ggcccggaaatcctcgcgattgccgacgagatgtcgctgcgcagcctgtcgttctcgacc
gcgctgcaggatctcgcgagcctgctgcaccggatcgcgtgggcgcagttcgcgccgggc
tcggtgctcgacgaatggccggaagcggccgacctgcgccggtttgctgagacgctgagc
cccgagcaggtgcagttgttctatcagatcgcgacggtcgggcgcgccgaactcggcctg
gcgccggacgaatacgccggtttcacgatgacgctgctgcggatgctcgcgttcgagccg
gccgtcggcgccggcagcgcaccgggcggtcagccgtccgtgccgccgcgtgcggtgccg
gccccgcgtgctacggcggcaccggccgccgccgcggcgaagccggtatcggccgcgccg
gcaagcgcagcgcgcccgccagccgcgacgccggctgcgccggtcgcccgttcggcgccg
gtgcaatcgagcgatgaagccgaacggccggccgccaagccggctgccgttcagtcaccg
gcagaagcagcgccggaaccggtcgcggctgacgtgcaagctgtcgagcctcctcagccg
gaaacgaaggcagcgcccgtcggcgacacgccgcctcccgcgcgcaaggaacctgagccg
cccgccgttgccgtcgtgcagcgaaacgacgaaccggctccgcaggcggaaccggcgccg
cgcgtcgcatcgcccgagccggccgccgcacggccggcggcgcgcgcgggcggtgccgcc
gccgcactcgacgtgctgcgcaatgcggggatgcgcgtgtcgtcggaccgcgggcgcgca
ggcgctgccgccaagccggctgcggcccagccggctgctgaaaagccggtcgcgccgcgt
ccggccgtccaggtgccgacgccgcgtgctgccgcccgtgcgccgcaagcagccgattcg
cgccagccgtcgccgccgtgggaagacatcccgcccgacgactacgtgccgctcagcgcc
gacgaaatgttcggcgggtccgacgacggcttcgtgccggtgttcgacagcggtcccgac
gacgtgcgcgtgacgccgaagccggcggacgcgcgtccggccgcgccgatcgacacgcgt
ccgctgccgcccgcgatcgcgctcgatccgatcggtttcgacggcgaatggccggcgctg
gccgcgcggttgccgctgaagggtgtcgcgtaccagctcgcgttcaacagcgagctgacg
gccgtcgatgcaactgcattgaaattgtccgtgccggtgccgcagtatgcggacgccgca
caggtggcgaagctgaaggccgcactggccgatgcgctcggcaagccggtcgaggtgacc
gtcgaggtcgggcccgcgcggcgcactgcggcggcgctcgatgcggccgcgcgcgcggcg
cgccagcgcgaagccgaacaggagattcacggcgatccgttcgtccagcagctcgtgcgc
gagttcggtgcacgcatcgtcgaagggtcggtgcgcccgctcgccgattcggcgccggac
ggcgcgccgccgacgctgcattga

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