KEGG   Burkholderia cepacia DDS 7H-2: DM42_3781
Entry
DM42_3781         CDS       T03302                                 
Name
(GenBank) DEAD/H associated family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
Organism
bced  Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:bced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bced03400]
    DM42_3781
Enzymes [BR:bced01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DM42_3781
DNA repair and recombination proteins [BR:bced03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DM42_3781
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C DprA_WH Lhr_WH ResIII HTH_IclR MarR_2 MarR HTH_Crp_2 DUF5805 TrmB LexA_DNA_bind
Other DBs
NCBI-ProteinID: AIO46384
LinkDB
Position
2:313852..318315
AA seq 1487 aa
MDVTATRPAARALDVFHPAVAAWFTRTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTL
TAFLCALDDLVRDALAHDGTLPDATLVVYVSPLKALSNDIHVNLDAPLAGIAESLAQLGL
PVPAIRTAVRTGDTTQAERAALRKRAPHILVTTPESLYVLLSSTSGRQMLSNVRSVIVDE
IHALASSKRGSHLALSLERLDALTGRALPRIGLSATQKPIDAVARFLVGGPADAPRDCAI
VDTGHTRERDLALELPNVPLEPVMATDVWEQVYDRIAGLAAAHRTTLVFVNTRRTAERMA
RHLADRLGKDAIAAHHGSLAKEHRFDAEQRLKRGELKLLVATASLELGIDIGDVDLVCQV
GSPRGIAPFLQRVGRSGHHVGGVPKGRLFPLSRDELVECAALLDCVQRGELDALRIPEAP
LDVLAQQIVAEVACTEWQEDALYASFTRAAPYARLTRERFDEVMKMLAEGFTSRRGVRGA
YLHRDVVGGTVRGRRNAMMTATTSGGTIPDMADYAVLLEPQGIQVGTVNEDFAIESLAGD
VFQLGNQSYRIIRVETGRVRVEDAQGQSPSIPFWLGEGLGRSDELSAAVGRLRARLDALF
AEGDRQVDSGGRKRAGGNAVSNAATEADAPAATGTALAPADSRLAPALRWLVDDLHLSPD
AARQIADYLARTRAALGALPTQDTLVMERFFDESGGTQLVIHSPFGSRINRAWGLALRKR
FCRNFNFELQAAATDDAIILSLSLAHSFALDEVWRYLRSASAEHVLIQALLDAPMFGVRW
RWNATTALALPRFTGGRRTAPQLQRMKSDDLLATVFPDQVACLENIVGEREIPHHPLVDQ
TLDDCLHDAMDTDGWLALLRRIESGAIELIARDLPAPSPLAAEILNAKPYAFLDDAPLEE
RRTQAVQSRRWSDPESADDLGALDVDAIDAVRDEAWPLVRDADEMHDALLTLACVADSEA
HAHAGWPERLAELAERRRATKLATPGGAALWVPVERLVCLRALHPDARMTPALKVPAACA
QPWEADAALVDVIRARLTGFGPLTLDAIAAPLGLPPASIATALAALEREGYVMRGRFTPG
AATDEWCERHLLARIHRYTVKRLRREIEPVERADFMRFLFHWQHLTPDTRGTGRDALAAV
VEQLEGYEAAASAWEDALLPARLTDYTAGGLDELCRSGKLVWTRIGAPARAAGTPVKTTP
IVLLPRRHLSAWHALRDPDAQPALSARATQVRDALAAHGAMFFDALLDELHMLPVELEQA
LGELVSAGLVNADSYAGLRALLKPAVKRSATYAPRTRRGGALIGGMDDAGRWALVQRQAP
SDDDAPAPKRSLATTDSDALEHIVWTLLRRYGVVFWRLLEREADWLPNWRELVRVLQRLE
ARGEIRGGRFVAGLAGEQFALPEAIPILRELRRQPGDGQYVCVTGADPLNLAGTLLPGDK
VPALAGNRVLFRDGVPVASLVSGTFHYAADLSPAAREDARLRLARSC
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggacgtcacagctacccgccctgccgcccgtgcgctcgacgtgttccacccggccgtc
gccgcgtggttcacgcgcacgtttgccgcgccgaccggcgcgcaggcgctcgcgtggccg
cacatcaaggccggccgctccacgctcgtcgccgcgccgaccggctccggcaagacgctc
accgcgttcctgtgcgcgctcgacgatctggtgcgcgatgcgctcgcgcacgacggcacg
ctgcccgacgcgacgctggtcgtctacgtgtcgccgctgaaggcgctgtcgaacgacatc
cacgtgaacctcgacgcgccgctcgccggcatcgccgaatcgctcgcgcaactcggcctg
ccggtgccggcgatccgcaccgcggtgcgcaccggcgacacgacgcaggccgaacgcgcc
gcgctgcgcaagcgcgcgccgcacatcctcgtcacgactcccgaatcgctgtacgtgctg
ctgtcgtccacgtcgggtcgccagatgctgtcgaacgtgcgctcggtcatcgtcgacgaa
atccatgcgctggcgtcgtccaagcgcggcagccatctcgcgctgtcgctcgaacgcctc
gacgcattgaccgggcgcgcgctgccgcgcatcgggctgtccgccacgcaaaagccgatc
gacgcggtcgcgcgcttcctggtcggcgggccggccgacgcgccgcgcgactgcgcgatc
gtcgacaccggccacacgcgcgagcgcgacctcgcgctggagctgccgaacgtgccgctc
gaaccggtgatggcgaccgatgtgtgggaacaggtgtacgaccgcatcgccgggctcgcg
gccgcgcatcgcacgacgctggtgttcgtcaacacgcgccgcaccgccgagcgcatggcg
cgccatctcgccgaccggctcggcaaggacgcgatcgccgcgcatcacggcagcctggcg
aaggagcaccgcttcgacgccgagcagcgcctgaagcgcggcgaactgaagctgctcgtc
gcgaccgcgtcgctcgaactcggcatcgatatcggcgacgtcgatctcgtctgccaggtc
ggctcgccgcgcggcatcgcgccgttcctgcagcgcgtcggccgctcggggcaccacgtc
ggcggcgtgccgaaggggcgactgtttccgctgtcgcgcgacgagctggtcgaatgcgcg
gcgctgctcgattgcgtgcagcgcggcgaactcgatgcgctgcggattcccgaagcgccg
ctcgacgtgctcgcgcagcagatcgtcgccgaagtcgcgtgcacggaatggcaggaggac
gcgctgtatgcaagcttcacgcgcgccgcgccgtacgcccggctgacgcgcgagcgcttc
gacgaagtgatgaagatgctcgccgaggggttcacgagccgtcgcggcgtgcgcggcgcg
tacctgcaccgcgacgtggtcggcggcacggtgcgcggccgccgcaacgcgatgatgacc
gccaccacgtccggcggcacgatccccgacatggccgactacgcggtgctgctcgaaccg
cagggtatccaggtcggcaccgtcaacgaggatttcgcgatcgagagcctggccggcgac
gtgttccagctcggcaaccagtcgtaccggatcattcgtgtcgaaacgggccgcgtgcgg
gtcgaggatgcgcaggggcaatcgccgagcattccgttctggctcggcgaggggctcggg
cgcagcgacgagctgtcggcggcggtcggccggctgcgcgcgcggctcgacgcgctgttc
gcggaaggcgaccggcaggtcgacagcggcgggcgcaagcgtgccggcggcaacgcggta
agcaatgcggcaacggaagccgacgcaccagccgcaacgggtaccgcgctcgcccccgcc
gacagccgcctcgcgcccgcgttgcgctggctcgtcgacgatctccacctgtcgcccgac
gccgcgcgccagatcgccgactacctcgcgcgcacccgcgccgcgctcggcgcgttgccg
acgcaggacacgctcgtgatggagcgtttcttcgacgaatcgggcggcacgcagctcgtg
atccattcgccgttcggcagccggatcaatcgcgcatgggggctcgcgctgcgcaagcgc
ttctgtcgcaacttcaacttcgaactgcaggccgccgcgaccgacgacgcgatcatcctg
tcgctgtcgctcgcgcacagcttcgcgctcgacgaagtgtggcgctacctgcgttcggcc
agcgccgagcacgtgctgatccaggcgctgctcgacgcgccgatgttcggcgtgcgctgg
cgctggaacgcgaccaccgcgctcgcgctgccgcgtttcaccggcggccggcgcaccgcg
ccgcaactgcagcggatgaaaagcgacgatctgctcgcgacggtgttccccgatcaggtc
gcgtgcctcgagaacatcgtcggcgaacgcgagattccgcatcatccgctcgtcgaccag
acgctcgacgattgcctgcacgacgcgatggacaccgacggctggctcgcgctgctgcgc
cggatcgaaagcggcgcgatcgaactcatcgcgcgcgacttgcccgcgccgtcgccgctc
gcggccgagatcctcaacgcgaagccctacgcgttcctcgacgacgcgccgctcgaggag
cgccgcacgcaggccgtgcagtcgcgccgctggagcgatcccgaatcggccgacgatctc
ggcgcgctcgacgtcgacgcgatcgacgcggtgcgcgacgaagcgtggccgctcgtgcgc
gacgccgacgaaatgcacgatgcgctgctcaccctcgcctgcgtcgccgacagcgaggcg
cacgcgcacgcaggctggcccgagcgactcgcggaactcgcggaacgccgtcgcgcgacg
aaactcgcgacgccgggcggcgccgcgctgtgggtaccggtcgaacggctcgtctgcctg
cgcgcgctgcatcccgacgcccgcatgacacccgcgctcaaggtgccggcggcatgcgcg
cagccgtgggaagccgatgccgcactcgtcgacgtgatccgcgcgcggctcaccggcttc
gggccgctcacgctcgatgcgatcgccgcgccgctcggcctgccgcccgcgtcgatcgcg
acggcgctcgcggcgctggagcgcgaaggctacgtgatgcgcggccgcttcacgccgggc
gcggccacggacgaatggtgcgaacgccacctgctcgcacgcattcatcgctatacggtg
aagcggctgcgccgcgagatcgagccggtcgaacgcgccgatttcatgcgcttcctgttc
cactggcagcacctgacacccgacacgcgcggcaccggccgcgacgcgctggccgccgtg
gtcgaacaactcgaaggctacgaggcggcggcaagcgcatgggaagacgcactgctgccc
gcgcggctcaccgactacacggcgggtggcctcgacgagctgtgccgctcgggcaagctg
gtgtggacccgcatcggcgcaccggcccgcgcggccggcacgcccgtgaagacgacgccg
atcgtgctgctgccgcgccgccatctttccgcgtggcacgcgctgcgcgaccccgatgcg
caaccggcgctgtccgcacgcgccacgcaagtgcgcgacgcgctcgccgcgcacggcgcg
atgttcttcgatgccctgctcgacgagctacacatgctgcccgtcgagctcgaacaggcg
ctcggcgaactcgtgtcggccggcctcgtgaatgcggacagctacgcgggcctgcgcgcg
ctgctgaagccggccgtcaagcgcagcgcgacctatgcgccccgcacgcgacgcggcggc
gcgctgatcggcgggatggacgatgccggccgctgggcgctcgtgcagcgtcaggcaccg
tcggacgacgacgcgcccgcgccgaaacgcagcctcgccacgaccgactccgacgcgctc
gagcatatcgtgtggacgctgctgcgccgctacggcgtcgtgttctggcggttgctcgaa
cgcgaagccgactggctgccgaactggcgcgaactcgtgcgcgtgctgcagcgcctcgaa
gcacgcggcgagattcgcggcggccgcttcgtcgccgggctcgcgggcgagcagttcgcg
ctgcccgaggccattccgatcctgcgtgaactgcgacggcaaccgggcgatggacaatac
gtgtgcgtgacgggcgccgacccgctgaatctcgctggcacgctgctgcccggcgacaag
gtgccggcgctggccggcaatcgcgtgctgtttcgcgacggcgtgcccgtcgcgtcgctg
gtatcgggtacgttccactacgcagccgacctgtcgcccgccgcgcgcgaggacgcacgg
ctgcggctcgcgcgttcctgctga

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