Burkholderia cepacia DDS 7H-2: DM42_657
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Entry
DM42_657 CDS
T03302
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM42_657 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bced03400
]
DM42_657 (uvrA)
DNA repair and recombination proteins [BR:
bced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM42_657 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM42_657 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_21
AAA_16
RsgA_GTPase
DUF4350
Motif
Other DBs
NCBI-ProteinID:
AIO47123
LinkDB
All DBs
Position
1:complement(741354..743951)
Genome browser
AA seq
865 aa
AA seq
DB search
MEVRGARENNLKEVDVSIPRNALVVFSGVSGSGKSSLAFGTIYAEAQRRYFESVAPYARR
LIEQAGVPDVDAIDGLPPAVALQQQRGSSNARSSVGSVTTLSSLVRMMYSRAGAYPANQP
MLYAEDFSPNTPQGACPTCYGLGHVYEVTEAIMVPDPSLSIRERAIASWPPAWQGQNLRD
ILVSMGYDVDRPWKDLPKKDRDWILFTEETPTVPVYAGFTPAETRAALKRKMEPSYMGTF
TGARRYVLHTFANTQSALMRKRVSRFMEGKPCPTCHGKRLKPEALSVTFAGVDIGAFMQM
PLDQLAALLEPIAQGDFRAHAAGAATDKEATRRDRAERAASGRAVHAVSPDVRRTSALSE
EKRLAAQRLAGGVMARLRQLRGLGLGYLTLDRATPTLSAGELQRLRLATQLSSLLFGVVY
VLDEPSAGLHPSDSQALYDALDRLRDAGNSVFVVEHDLDLMRRAQWLVDVGPDAGERGGR
VLYSGEPDGLRKIAESRTARYLFDEIPAPGSRAREATGWLELQDIHRHNLHGVNARIPLG
VLTAVTGISGSGKSSLVAQALPELVLLHLGHEPEDDVAESATSEGPAVIEATGGHLAGDV
DAVQRLVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATPDARRRRYDAGRFSFNVAKGR
CETCEGEGFVSVELLFMPSVYAPCPTCHGARYNEATLKVQWNGRNIAEVLQMTVDEASEF
FAGEDAVARPLQLLRDIGLGYLRLGQPATELSGGEAQRIKLATELQRSQRGRSLYVLDEP
TTGLHASDADRLLVQLQRLVDAGNTVVMIEHDMRAVAQADWVIDVGPGAGAAGGSIVVAG
SPQQVARTSGSRTAPFLAQELARAE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtggaagtgcgcggtgcgcgcgagaacaacctcaaggaggtggacgtctccatcccgcgt
aacgcgctggtggtgttctcgggtgtctccggctccggcaagtcctcgctggccttcggc
accatctatgccgaggcccagcgacgctacttcgagtcggtggccccctatgcgcggcga
ctgatcgagcaggccggcgtgccggacgtcgatgcgatcgacggcctgccgccggcggtg
gcgctgcagcagcagcggggctccagcaacgcgcgttcctccgtgggcagtgtgaccacc
ttgtccagcctggtgcggatgatgtattcgcgcgccggcgcctatccggccaaccagccg
atgctgtacgccgaggatttttcgcccaacacgccgcagggagcgtgcccgacctgctac
ggcctgggccatgtgtacgaggtgaccgaggccatcatggtgcccgatccctccctgagc
atccgcgagcgggcgatcgcctcctggccccccgcctggcaaggccagaacctgcgcgac
atcctggtcagcatgggctacgacgttgaccgaccgtggaaggacctgccgaagaaggat
cgcgactggattctgttcaccgaggaaacaccgacggtgccggtgtacgccggcttcacg
cccgccgaaacccgcgccgcgctcaagcgcaagatggagccgagctacatgggcaccttc
accggcgccaggcgctacgtgctgcacacctttgccaacacccagagcgcgttgatgaga
aagcgcgtgtcccggttcatggagggcaaaccgtgccccacctgccacggcaagcggctc
aagcccgaggcgctgtcggtcaccttcgccggcgtggacatcggcgcgttcatgcagatg
ccgctggaccagttggcggccttgctcgaacccatcgcccagggcgatttccgcgcccat
gcagcgggggcggctacggacaaggaagcgacccgacgcgaccgtgccgaacgcgcggcc
tccggccgcgccgtccatgcggtatcgcccgacgtgcgccgcacctcggcgctatcggaa
gaaaagcgcctcgccgcgcagcgcctggccggtggcgtgatggcacgcctgcgccaactg
cgtgggctgggcctgggctacctgacgctggaccgggccacgccgacgctttcggccggc
gagttgcagcgcctgcggctggccacgcaattgagttccctgctgttcggtgtcgtgtac
gtgctcgacgagccctccgcgggcctgcacccctccgatagccaggccctgtacgacgcg
ctcgaccggctgcgcgacgccggcaactcggtgttcgtggtggagcacgacttggacctg
atgcgccgcgcgcaatggctggtggatgtcgggccggatgctggggagcgtggcggccgc
gtgctctacagcggcgagccggatggcctgcgcaagattgccgaatcgcgtactgcacgc
tacctgttcgatgagatccccgcgccgggaagccgggcacgcgaagcgaccggctggctg
gagctgcaggacattcaccgccacaacctgcatggcgtgaatgcgcgcattccgctgggc
gtgctgacggccgtcaccggcatctccggctcgggcaagtccagcctcgtcgcgcaggcc
ctgccggagctggtgctgctgcacctgggccacgagccggaagacgatgtagccgaaagc
gccaccagcgaagggccggcagtgatcgaagcgaccggcggccatctggcgggcgacgtg
gacgccgtacagcgtctggtgcaggtggaccagaaaccgatcgggcgcacgccgcggtcg
aacctggccacctacacgggcctgttcgaccatgtgcgcaagctgttcgctgccacgccc
gatgctcgacgccgccgctatgatgccggacggttctcgttcaacgtcgccaaggggcgc
tgcgagacttgcgagggcgagggtttcgttagcgtggaactgctgttcatgcccagcgtg
tacgcgccgtgcccgacctgccatggcgcgcgctacaacgaggccacgctgaaggtgcag
tggaacgggcgcaacatcgccgaggtgctgcagatgaccgtggacgaggccagcgaattc
ttcgcgggtgaagacgcggtggcaaggcccctgcaactgctgcgcgacatcggactgggc
tatctgcgcctgggacaaccagccactgagctttccggtggcgaggcgcagcgcatcaag
ctggcgaccgagcttcagcgcagccagcgcggccgaagcctgtacgtgctcgacgagccg
actaccgggctgcatgcgtcggacgccgaccggctgctggtgcagttgcagcgcctggtc
gatgccggcaataccgtagtgatgatcgaacacgatatgcgcgcggtggcccaggccgat
tgggtgatcgacgtggggcctggtgcaggcgctgccggcggcagcatcgtggtggcgggc
tcccctcagcaggtggcccgaacgtctggcagcagaaccgctccgttccttgcacaggag
ttggcgcgggccgagtag
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