Burkholderia cepacia DDS 7H-2: DM42_6882
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Entry
DM42_6882 CDS
T03302
Name
(GenBank) bacterial extracellular solute-binding s, 5 Middle family protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM42_6882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_6882
Transporters [BR:
bced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DM42_6882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MG4
Motif
Other DBs
NCBI-ProteinID:
AIO43501
LinkDB
All DBs
Position
3:570590..572173
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AA seq
527 aa
AA seq
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MSDDIDNGGKGGFTRRDMMRVMAASGMMAVGGGGLLTSAQSAFAAPAPKRGGKIRVANES
SSTADTLDPAKGSTGADYIRFFMFYSGLTQLDGSLTPQMNLAESLHTTDAKTWIIKLRKG
VTFHDGKPVGPADVVFSLMRHKNAATASKVKPLADQFADAKASGPDEVTLTLASANADLP
VILATPQLVIVKDGTTDFATGIGCGPYKLKSFKPGVSTVGVRNDSYFKPGMPYLDEIELI
GISDSAARLNALLSGDVHLINAIDPRSTQRVASTPGYALKETKSGLYTDLIMRSESPITA
NPDFVEGMKYLFDREQIRSAVFRGYAVIGNDQPIPPGHRYFNASLPQRPHDPDKAKFLFQ
KAGALGTALPPIYATSDANGSIEMAVLLQQAGQKIGLNLQVNRVSPDGYWSNHWMKHPLG
FGNINPRSSADVLFTQFFKSDAAWNESGWKNAKFDQLLLAARSETDDAKRKQMYGEMQTL
VAQQGRVGIPAFISFLDGYDKRLAGLGSIPTGGMMGFMFAEYVWWNA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgatatcgacaatggcggcaagggcggcttcacgcgccgcgacatgatgcgg
gtcatggcggcgagcggcatgatggccgtcggcggcggcggattgctgacgagcgcgcag
tcggcattcgccgcgcccgcgccgaagcgcggcggcaagatccgggtcgcgaacgaatcc
agctcgaccgccgatacgctcgacccggccaagggctcgacgggcgcggactacatccgc
ttcttcatgttctacagcggcctcacgcagctcgacgggagcctcacgccgcagatgaat
ctcgccgagtcgctgcacacgaccgatgcgaagacctggatcatcaagctgcgcaagggc
gtcacgttccacgacggcaaacccgttggcccggccgacgtggtgttctcgctgatgcgc
cacaagaacgcggccaccgcgtcgaaggtcaagccgctcgccgatcagttcgcggacgcg
aaggcgagcggcccggacgaggtcacgctcacgctcgccagcgcgaacgccgatctgccg
gtcatcctcgcgacgccgcaactcgtgatcgtcaaggacggcacgaccgatttcgcgacc
ggcatcggctgcggcccgtacaagctcaagtcgttcaagccgggcgtgtcgaccgtcggc
gtgcgcaacgacagctacttcaagccgggcatgccgtatctcgacgagatcgaactgatc
ggcatcagcgacagcgccgcgcgcctgaacgcgctgctgtcgggcgacgtgcacctgatc
aacgcgatcgacccgcgctcgacgcaacgggtcgcgtcgacgcccggctatgcgctgaag
gaaaccaagtcggggctctataccgacctgatcatgcgcagcgaaagcccgatcaccgcg
aatcccgatttcgtcgaggggatgaagtacctgttcgatcgcgaacagatccgctcggcg
gtatttcgcggctatgcggtgatcggcaacgaccagccgattccgccggggcatcgctac
ttcaacgcgtcgctgccgcagcggccgcacgatccggacaaggcgaaattcctgttccag
aaggccggcgcgctcggcacggcgctgccgccgatctatgcgacgtccgatgcgaacggg
tcgatcgaaatggccgtgctgctgcagcaggccggccagaagatcgggctgaacctgcag
gtcaaccgcgtgtcgcccgacggctactggtcgaaccactggatgaagcatccgctcggc
ttcggcaacatcaacccgcgctcgagcgccgacgtgctgttcacgcagttcttcaagtcg
gacgccgcgtggaacgagtcgggctggaagaacgcgaagttcgatcagctgctgctcgcc
gcgcgctcggagaccgacgatgcgaagcgcaagcagatgtacggcgagatgcagacgctc
gtcgcgcagcagggccgggtcggcattccggcgttcatcagcttcctcgacggctacgac
aagcggctcgcgggcctcgggtcgatcccgaccggcgggatgatgggcttcatgttcgcc
gagtacgtgtggtggaacgcctga
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