Burkholderia cepacia DDS 7H-2: DM42_749
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Entry
DM42_749 CDS
T03302
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bced
Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bced03019
]
DM42_749
03009 Ribosome biogenesis [BR:
bced03009
]
DM42_749
Messenger RNA biogenesis [BR:
bced03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DM42_749
Ribosome biogenesis [BR:
bced03009
]
Eukaryotic type
Pre-60S particles
RNases
DM42_749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIO48618
LinkDB
All DBs
Position
1:complement(835135..835755)
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AA seq
206 aa
AA seq
DB search
MTDTAASASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAI
HQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASVSAGESAPAA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgcttccgccagccagcccgcgctcgtgcgcaacgagttgaacctc
gtctggctcgacatggagatgacgggcctcgacccggataacgaccgcatcatcgagatc
gcggtcgtcgtgaccaactccacgctcgacattgccgtcgagggcccggtgttcgcgatc
caccagagcgacgagacgctcgcgaagatggacgactggaacaagtcgacgcacggccgt
tccggcctgatcgaccgcgtgcgcgcatcgaccgtgaccgaggcggacgccgccgcgcaa
ctgcaggcgttcctcgcgcagtacgtgtcgcccggcaagtcgccgatgtgcggcaactcg
atttgccaggaccgccgcttcatggcgcgctggatgccggaattcgagcgattcttccac
taccgcaacctcgacgtcagcacgctcaaggagctgtgccgccgctggcagccggccatc
tacaagggtttccagaagcgggcgatgcacactgcgctcgcggacatccacgaatcgatc
gacgagctgaagtattaccgcgagcatttcctgattccggccgcgtcggtgtcggcaggg
gaatccgcgccggccgcgtga
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