Bacillus cereus FT9: BcrFT9_04118
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Entry
BcrFT9_04118 CDS
T03417
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bcef
Bacillus cereus FT9
Pathway
bcef02020
Two-component system
bcef02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BcrFT9_04118
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BcrFT9_04118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcef03021
]
BcrFT9_04118
Transcription machinery [BR:
bcef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BcrFT9_04118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_32
Motif
Other DBs
NCBI-ProteinID:
AIE81625
LinkDB
All DBs
Position
complement(4841502..4842809)
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AA seq
435 aa
AA seq
DB search
MKASLLQEQSLRLAMTQELRQAITMLQYNVQELSEFLYEQSLENPLIELGGFEREKKKSS
NTSKSTSKQVENQMEIYSVDSTTIQQHLLNQIQYYKIEEEERKVASFIIMNMDGNGYLQE
TNEELASLLSAPIHVVDRSVELVQSLEPAGVGARNIQECLTLQLKRLQRRNGLAEEVVED
HFAYFVKKDWRKLVQVLKCSNEELQSAVNCITSLQPKPGLAFSSDKPLYIVPDMAVKKDG
DRLVLQMNERNMPRIEIHSEYSALLNNSESEVASYVSEKYQHVQWIMRSLKQRKQTLLQV
MTIIMEKQRDFFWKGPEYLKPLALKEVAEELSVHESTISRATRNKYVQTPHGLFEMKSFF
SNAVSTTEDEAVSTKRVKQFIQTLVEAENKKKPLSDQKISKLLEEEHEIVISRRTVAKYR
EQMHIPASSLRKTIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggcaagtcttttacaagaacaaagcttacgtttggcaatgacacaagagttaagg
caagcgattacaatgctccagtataatgtacaagaattatcggagtttttgtatgagcaa
tcgttagagaatccccttattgagttaggtggttttgagagggagaagaaaaagagctct
aacacaagtaaaagtaccagcaaacaagtcgagaatcagatggaaatctacagtgtggat
tctacaacgattcagcaacatttattaaatcaaatacagtattataaaatagaggaagaa
gagcgaaaagtagcttctttcattattatgaacatggatggaaatgggtatttacaagaa
acgaacgaagagttagcaagcctcctttccgcaccgattcatgtagtcgaccgctctgta
gagcttgtccaatcacttgagccagcaggggtaggggcgcgtaatatacaggaatgtcta
actttgcaattgaagcgcttacaaaggcggaatggattagcagaagaggttgtggaagat
cacttcgcttatttcgtaaagaaagattggcgaaagctcgttcaagtgttgaagtgtagt
aatgaggaattacagagtgctgtaaattgtataacgtcattacaaccaaaaccaggtctt
gcgttttcttctgataaaccactttatattgtgcctgatatggcggtgaaaaaagacggc
gatcgtctcgttttacaaatgaatgagagaaatatgccgagaattgaaattcattctgaa
tatagtgcgcttcttaataatagtgaaagtgaagtagcatcttacgtgtcagaaaagtat
cagcatgtacagtggattatgcgtagtttaaaacagagaaaacaaacccttctgcaagtg
atgaccattattatggaaaaacaacgtgatttcttctggaaaggtccggagtatttaaag
ccacttgctttaaaagaagtagcagaagagttaagcgtgcatgaatcgacaattagtcgt
gcaacgcgaaataaatatgtgcaaacaccacacggtttatttgagatgaaatcgttcttt
agtaatgccgtttcgactactgaagatgaagcagtttctacaaagcgtgtaaaacaattt
attcaaacgcttgttgaggcagagaataagaaaaagccactttcagatcaaaagatttca
aaattattagaagaagagcatgaaatcgttatttctcgaagaacagtggcgaagtataga
gagcaaatgcacattccagcgtcgtcattacgaaaaacaatcggatag
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