Burkholderia cenocepacia DDS 22E-1: DM39_1114
Help
Entry
DM39_1114 CDS
T03308
Name
(GenBank) RHS repeat-associated core domain protein
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
OCRE
Motif
Other DBs
NCBI-ProteinID:
AIO32743
UniProt:
A0A088U648
LinkDB
All DBs
Position
1:1200946..1205538
Genome browser
AA seq
1530 aa
AA seq
DB search
MAGSTESIQSFIDTAVVPINQITTPDLHAGAARFDSWLQHISGGWVTLARLEQVAGSLPV
LGNVMAAIDLCGDIVTMYEARNGRRSQLDKALEWANLGIDLLGSVPAPGTGPARMALRPT
LALVRQAVKREIKDIPAAVAAVIEHNFSATLMGELGQYVDKAIALVPQLLNECAAKIERI
LTELVHVLRALASGQLTDPRQDLKRARAAAGELMRDPLQHYDKLFTAVWYAYVAGAKAEA
NVAAALASQVVGKQQMNAAADWLLTMVPIARQEITALSRSDVGTVMSMLIMLKQAVALYE
KRKTHVAATVDPNKSNQARQKATGQGFEARHDEAPAQKPGVPPCKACETGQPAAGGQRSI
GYALGDESFTHTDFVLPGIVPIEWARMYRSNFGAHDERGPLGPRWTTPYHVSFEPRGDGF
IYHDAYGRSVTYPALTPLQPHHDRIESCVLSRLPDGGIQVVRGEVLTETYVQHGECFRLT
RIADRSGNAVTLTWDNGLLSRVANGMGDVAQLMHDASGRVVRVTLLNGDGEQVRTLAAYR
YDEAGDLVDATDEDGASWNYAYSHHLVTRYTDRTGRGMNLEWDGTHLDAKAVHEWADDGT
FDARLTWHDRLRLTFVTDALGNTTQQYYDMNGYVYRIVYPDNTEEWFYRDAAKHVTAHVF
QDGTTESFTWDDAGHLTSHTRQDGRTAHFVYDRRGDMIGVQDPEGHRWERYHNSRGLVTE
AKDPLGRVTRYEYNRAGLPVAITDPKGGTKQLAWRPDGQIERYTDCSGKSATWKYDERGR
LVQQQSAGGEVTRYGYEAGQLAWVIGPDGSRETFERDAEGRLLTHTDGLNRQTRYSYTRA
GLLARRTNARGDTLEYAWNPLGKIAALRNENGREYRFGYDTFARLRSETDFDGCVTTYYR
DARNGQITHRLQGGTMQAFEYDAMGRLAQRSGWPAQFGERNTVYLDPPAHERVEREAFQY
DGFGRIATARNAAARVHRFYDPVGNLSSEHVYLPTHQDDHESVWRHEYDELGTRIATTRP
DGHRVDWLTYGSGHVHGLLLDGQSVANFERDDGHRETLRELGNGLKQTTHYDTAGRLARQ
TLQGTAGKVMDRRYQFDAAGQLTQISDMRRGEIQYAYDPVGRLLRAQSSLGVETFAFDPA
SNIVEATERDAHGIGVMGGKQSTPLLDNLLKDYAGTHFKYDDRGNLAERTHNGVRMTFQW
DAFGRMAGATDRHMRATYTYDALGRRIAKLTEPVVPYLPDAGSGWRDAERQRLKQERGYG
LTLYGWDGDTLAYETAWDQRKTTHYVYEPNSFTPLAQASGPAMVFGGGERRAFATVAYYH
CDQIGTPQELTDETGEVAWSARYKAWGEAKEAISDAARKAGIANPLRFAGQYFDAETGLH
YNRHRYYDPASGRFVSKDPIGLQGGLNVYQYAPNPVDWIDPLGLQKKRPRVPPHISQQKQ
AGHVLGEPQYDNRVKQGKATSCFCDWNDAVQYTDDAWNQGIPVPGRSNVRDHDFKKPVGF
GPNGGTQTSVRVHRDNAGKIHGHPKGPEAP
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggctggtagcaccgaatcgatccagtcgttcatcgatacggcagttgtgccgatcaac
caaatcaccacgcccgacctccacgccggggcggcacgttttgattcgtggctccagcac
atctccggaggatgggtgacgctcgcccggctggagcaggtcgccggctccctgccggta
ctcggtaacgtcatggccgccatcgatttgtgtggcgacatcgtgacgatgtacgaggca
cgaaacggtcgtcgttcccagctcgacaaagcgctcgaatgggccaacctcggcatcgac
ctgcttggctcggtgccggcgccgggaacgggacccgcacgcatggcgctgcgtccgacg
ctcgcgctggttcggcaagcggtgaagcgggaaataaaggatattcccgccgctgtcgcg
gccgtcatcgaacacaatttcagcgcgaccttgatgggcgaacttggccagtacgtcgac
aaggccattgcgctggtccctcagctgctgaatgagtgtgcggcaaagatcgaacggatc
ctgaccgagctggtgcatgtcctgcgtgcattggcgtcggggcagttgaccgatccgcgg
caagacctgaagcgcgccagggccgccgccggggaattgatgcgcgaccccctgcagcac
tacgacaagctgtttacggccgtctggtatgcctacgtggcaggcgcgaaagccgaggcc
aacgtggccgccgcgctcgcatcgcaagtggtcggcaagcagcaaatgaacgccgccgcc
gattggctgctgacgatggtaccgatagcccggcaggaaatcaccgcgctgtcgcgcagc
gatgtgggcacggtgatgtcgatgctcatcatgctcaagcaggcggtcgcgctttatgag
aagaggaagacccacgtcgcggcaacggtcgacccgaacaaatccaatcaggcgcgccag
aaagccaccggtcaaggattcgaagcgcgtcacgacgaagcgcccgcgcagaagccgggc
gtgccaccctgcaaggcgtgcgaaaccggccagccagccgccggcggacagcggtcgatc
ggctacgccttgggcgacgagtcatttacgcacaccgattttgtgctgcccggtatcgtc
ccgatcgagtgggcgcgcatgtaccgctcgaactttggcgcgcacgacgagcgcgggccg
ctcgggccgcgctggacgacgccgtatcacgtcagtttcgagccgcgcggcgatggcttc
atctatcacgacgcgtacggccgcagcgtcacttatcccgcgctcacgccccttcagcca
caccatgaccggatcgaatcgtgcgtgctgtcgcgcttgccggacggcggtattcaggtg
gtgcgtggcgaagtgctgaccgaaacctatgtgcagcatggcgagtgcttcaggctgaca
cggatcgccgatcgttcgggtaacgccgtgacgctgacgtgggataacggcctgctgtcg
cgcgtggcgaacggcatgggggacgtggcgcagctgatgcacgacgcgtcggggcgcgtg
gtacgggtcacgctgctgaatggcgacggcgagcaggtccgcacgctcgcggcctatcgc
tacgacgaagcgggcgatctggtggacgcgaccgacgaggatggcgcatcgtggaactac
gcctattcgcatcacctcgtcacgcgctacacggaccgcaccggacgcgggatgaatctg
gaatgggatggcacgcacctggacgcgaaggccgtccacgaatgggctgacgacggcacg
ttcgatgcgcgcctgacgtggcatgaccggctgcgcctgaccttcgtcaccgacgcgctc
ggcaacacgacgcagcagtattacgacatgaacggctacgtgtaccggatcgtgtatccg
gataacacggaagaatggttctatcgcgatgcggccaagcacgtcacggcacacgtgttt
caggacggcacgaccgaatcgttcacgtgggacgatgcgggccatctcacgtcgcacacc
cggcaggatggccgcaccgcgcattttgtctacgaccggcgcggcgacatgatcggcgtg
caagaccccgagggccatcgttgggagcgttaccacaacagccgggggttggtaacggaa
gcgaaggatccgctcgggcgcgtgacgcggtatgaatacaaccgggcgggtttgccggtc
gcgatcaccgatcccaagggcggcacgaaacagctcgcctggcggccggacggccagatc
gagcgctatacggactgttcgggcaagagcgcgacgtggaaatacgatgagcgcggccga
ctcgttcagcagcagagcgccggcggcgaggtcacccgctacggatacgaggccggacaa
ttggcgtgggtgatcggcccggacggcagccgcgaaaccttcgagcgcgacgccgaaggg
cggctgctgacgcataccgatgggctgaaccggcagacccgttacagctatacgcgcgcc
gggctgctggcgaggcggacgaacgcgcgcggagatacgctggaatatgcgtggaatcca
ctcggcaagattgccgcgctgcgcaacgagaacggccgagagtatcgattcggctacgat
accttcgcccggctgaggagcgaaaccgacttcgacggctgcgtgacgacctactaccgg
gatgcccgcaacggccagatcacgcaccggttgcagggcggcacgatgcaggcgttcgag
tacgacgcgatgggtcgactcgcgcagcgctcgggatggccggcgcagttcggcgagcgg
aacacggtgtatctcgacccgccggcgcacgaacgggtcgagcgcgaagcgttccaatac
gacgggttcggacgcatcgcgactgcgcgcaacgcagcggcccgcgtgcaccgcttctac
gatccggtcggcaacctgagcagcgaacacgtctatctccccacccatcaggacgatcac
gagtccgtgtggcgtcacgaatacgacgaactcggcacgcgtattgcgacgacccgccca
gacggtcatcgggtggactggctgacttacggttccggtcacgtgcacggcctgctgctg
gacggtcagagtgtcgcgaacttcgagcgtgacgacggacaccgggaaacgctgcgtgaa
ctcggcaacggcctgaaacagacgacgcactacgacacggccggccgactcgcgcggcag
accttgcaggggacggccggcaaggtgatggaccggcgctaccagttcgacgcggcgggc
cagttgacccagatttcggacatgcggcgcggcgaaattcagtacgcttacgacccggtc
ggccggctgctgcgtgcgcagtcgtcgttgggcgtcgagacgttcgccttcgatccggcc
agcaatatcgtggaagcgaccgagcgcgacgcacacggcatcggcgtgatgggcggcaag
caatcgacgccgctgctggacaatctgctgaaggattacgccggtacgcacttcaaatac
gatgaccggggcaatctggcggaacgcacgcacaacggcgtgcggatgacgtttcagtgg
gatgccttcgggcggatggcgggggcgaccgaccggcacatgcgggcgacgtacacgtac
gacgcgctcggccggcgcattgcgaagctgacggagccggtggtgccgtatctgcctgac
gcgggcagcggatggcgggacgcggaacggcaacgtctgaagcaggaacgcgggtacggt
ctcacgttgtacggatgggacggcgacacgctggcctatgagacagcgtgggaccaacgc
aagacgacgcactatgtgtacgagccgaacagctttacgccgctggcccaggcgagcggg
cccgcgatggtgttcggcggcggcgaacggcgcgcctttgccaccgttgcgtactatcac
tgcgaccagattggaacgccacaggagctcactgacgagaccggcgaggtggcctggtca
gcgcgatataaggcgtggggcgaagcgaaggaagcgatcagcgacgccgcgcgcaaggcc
ggcatcgctaacccgctgcgtttcgcggggcaatacttcgatgcagagacggggctgcac
tataaccggcatcggtactacgatccggcgtcgggacggttcgtatcgaaggacccgatt
gggctacaaggtgggctgaacgtctatcaatacgcgccgaacccggttgactggattgat
ccacttggcttacagaagaagcggcctcgtgtgcctccgcacatctcacaacagaaacaa
gcgggacacgtcttaggtgagccacagtatgataatcgcgtaaaacaaggtaaggcgaca
tcgtgtttttgtgattggaatgatgcagttcaatatacagatgatgcttggaatcaagga
atccctgttcccggacgttcaaatgttcgagatcacgattttaagaagccggtagggttt
ggccctaacggaggtactcaaacttcagtgcgtgttcaccgagacaatgcagggaaaatt
catggacatcccaaaggaccagaagccccctaa
DBGET
integrated database retrieval system
