KEGG   Burkholderia cenocepacia DDS 22E-1: DM39_5944
Entry
DM39_5944         CDS       T03308                                 
Name
(GenBank) sigma-70, region 4 family protein
  KO
K19666  LuxR family transcriptional regulator, quorum-sensing system regulator SolR
Organism
bcen  Burkholderia cenocepacia DDS 22E-1
Pathway
bcen02020  Two-component system
bcen02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bcen00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DM39_5944
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DM39_5944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bcen03000]
    DM39_5944
Transcription factors [BR:bcen03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    DM39_5944
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4 Sigma70_r4_2 HTH_20 DUF4623 HTH_23 HTH_11
Other DBs
NCBI-ProteinID: AIO34352
UniProt: A0A088UCT0
LinkDB
Position
2:2880543..2881262
AA seq 239 aa
MELRWQDAYDQFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFDTYPD
GWMAHYQAQNYIEIDSTVRDGALSTNMIVWPDVDKIEPCPLWRDAHDCGLSVGVAQSSWA
ARGAFGLLSIARHADPLTPAEINMLTLQTNWLANLSHSLMSRFMVPKLSPEARVALTARE
REVLCWTAEGKTACEIGQILSISERTVNFHVNNILEKLGATNKVQAVVKAISAGLIETP
NT seq 720 nt   +upstreamnt  +downstreamnt
atggaactgcgctggcaggacgcctacgatcaattcagcgccgcggaagacgagcagcag
ctcttccagcggatcgccgcctattcgaaacggctcggcttcgaatactgctgctacggc
attcgcgtgccgctgcccgtgtcgaagccggccgtcgcgatcttcgatacctatccggac
ggctggatggcgcactaccaggcgcagaactatatcgagatcgattcgacggtccgcgac
ggcgcgctgagcacgaacatgatcgtctggccggacgtcgacaagatcgagccgtgcccg
ctgtggcgggacgcgcacgactgcgggctgtcggtcggcgtcgcgcagtcgagctgggcg
gcgcgcggcgccttcgggctgctcagcatcgcgcgtcacgccgatccgctgacgcccgcc
gagatcaacatgctgacgctgcagacgaactggctggcgaacctgtcgcattcgctgatg
agccgcttcatggtgccgaagctgtcgcccgaggcgcgggtcgcgctgacggcgcgcgag
cgcgaggtgctgtgctggaccgccgaaggcaagaccgcatgcgaaatcggccagatcctc
agcatctccgagcgcacggtcaacttccacgtcaacaacatcctcgagaagcttggcgcg
acgaacaaggtccaggcggtcgtcaaggcgatttcggcggggctcatcgagacgccttaa

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