Burkholderia cenocepacia DDS 22E-1: DM39_5944
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Entry
DM39_5944 CDS
T03308
Name
(GenBank) sigma-70, region 4 family protein
KO
K19666
LuxR family transcriptional regulator, quorum-sensing system regulator SolR
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen02020
Two-component system
bcen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DM39_5944
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM39_5944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcen03000
]
DM39_5944
Transcription factors [BR:
bcen03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
DM39_5944
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4
Sigma70_r4_2
HTH_20
DUF4623
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AIO34352
UniProt:
A0A088UCT0
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All DBs
Position
2:2880543..2881262
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AA seq
239 aa
AA seq
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MELRWQDAYDQFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFDTYPD
GWMAHYQAQNYIEIDSTVRDGALSTNMIVWPDVDKIEPCPLWRDAHDCGLSVGVAQSSWA
ARGAFGLLSIARHADPLTPAEINMLTLQTNWLANLSHSLMSRFMVPKLSPEARVALTARE
REVLCWTAEGKTACEIGQILSISERTVNFHVNNILEKLGATNKVQAVVKAISAGLIETP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgctggcaggacgcctacgatcaattcagcgccgcggaagacgagcagcag
ctcttccagcggatcgccgcctattcgaaacggctcggcttcgaatactgctgctacggc
attcgcgtgccgctgcccgtgtcgaagccggccgtcgcgatcttcgatacctatccggac
ggctggatggcgcactaccaggcgcagaactatatcgagatcgattcgacggtccgcgac
ggcgcgctgagcacgaacatgatcgtctggccggacgtcgacaagatcgagccgtgcccg
ctgtggcgggacgcgcacgactgcgggctgtcggtcggcgtcgcgcagtcgagctgggcg
gcgcgcggcgccttcgggctgctcagcatcgcgcgtcacgccgatccgctgacgcccgcc
gagatcaacatgctgacgctgcagacgaactggctggcgaacctgtcgcattcgctgatg
agccgcttcatggtgccgaagctgtcgcccgaggcgcgggtcgcgctgacggcgcgcgag
cgcgaggtgctgtgctggaccgccgaaggcaagaccgcatgcgaaatcggccagatcctc
agcatctccgagcgcacggtcaacttccacgtcaacaacatcctcgagaagcttggcgcg
acgaacaaggtccaggcggtcgtcaaggcgatttcggcggggctcatcgagacgccttaa
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