Burkholderia cepacia ATCC 25416: APZ15_30750
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Entry
APZ15_30750 CDS
T04772
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bcep
Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcep03021
]
APZ15_30750
Transcription machinery [BR:
bcep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APZ15_30750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
DUF134
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ALK22601
UniProt:
A0A806VT03
LinkDB
All DBs
Position
2:3044692..3045252
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AA seq
186 aa
AA seq
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MSDGDPDAALVARVGARDASAVRVLVARKLPRLLALATRMLGDRTEAEDVAQETFLRIWK
QAPGWREGEARFDTWLHRVVLNLCYDRLRGRREEPVDVLPDVPDPQPEPATRAETRSRDA
RVRQALAALPARQREALVLQYYQDMSNMEAADLMGITVDALESLLARARRNLRAQLAGDS
PSEDIR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacggcgatccggacgccgcgctggtggcacgggtcggcgcgcgcgacgcgtcg
gccgtgcgcgtgctcgtcgcgcgcaagctgccgcggctgctcgcactcgcgacgcgcatg
ctcggcgaccgcacggaagccgaggacgtcgcacaggagacgttcttgcggatctggaaa
caggcgccgggctggcgcgagggcgaggcgcggttcgacacgtggctgcatcgcgtcgtg
ctgaacctgtgctacgaccgcttgcgcggccgccgcgaggaaccggtcgacgtgttgccc
gacgtgcccgatccgcaaccggagccggccacccgcgcggagacccgctcgcgcgacgcg
cgcgtgcggcaggcgctcgcggcgttgccggcgcggcagcgcgaagcgctcgtgctccag
tactatcaggacatgtcgaacatggaggcggccgacctgatgggcattaccgtcgacgcg
ctggaaagcctgctcgcgcgcgcgcggcgaaacttgcgcgcgcaactggccggcgattca
cctagcgaggacatccgatga
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