Burkholderia cenocepacia DWS 37E-2: DM40_5700
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Entry
DM40_5700 CDS
T03488
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcew03032
]
DM40_5700
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_5700
Enzymes [BR:
bcew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DM40_5700
DNA replication proteins [BR:
bcew03032
]
Prokaryotic type
DNA Topoisomerases
DM40_5700
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DM40_5700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIO37766
UniProt:
A0AA86FGM2
LinkDB
All DBs
Position
3:complement(794010..795074)
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AA seq
354 aa
AA seq
DB search
MNKRASLTAPANACAVAASLRHVDDRRPGYTRRRLRNGFAYYTQDGVRIRDADEIARINA
LAIPPAYTDVWICMDSRGHLQATGRDARGRKQYRYHPLWRETRDANKYARMAAFARALPR
IRARVARDLALPGMPRDKIVATIVRLLDTTLARIGNAEYARENASYGLTTLRKRHVTIRP
GQVRLRFTGKSGIEHDVTVEDPRVGRIVRRCAELPGHELFQYLDDDGARHSVGSSDVNDY
LRDAAGAEFTAKDYRTWAGSVQALALLRRIPHQGVTHARKQIVETVRAVADILRNTPAVC
RRCYIHPLVLETFEAGELDTLEVVRKPRGLRADEAAFVALLERAARRERRRARR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacgcgcgtcgcttacggcgccggcgaacgcgtgtgcggttgccgcgtcgctg
cgccatgtcgacgaccggcgccccgggtacacgcgtcgccggctgcgcaacggcttcgcg
tattacacgcaggatggcgtgcggatccgcgatgccgacgagatcgcgcgcatcaacgcg
ctcgcgattccgcccgcgtacaccgacgtgtggatctgcatggactcgcgcggccatttg
caggcaacgggccgcgatgcgcgcgggcgcaagcagtatcgctaccacccgctgtggcgc
gagacgcgcgatgcgaacaaatacgcgcggatggcggccttcgcgcgcgcgctgccgcgc
atccgcgcacgggtcgcgcgggacctggcgctgcccgggatgccgcgcgacaagatcgtc
gcgacgatcgtccggctgctcgacacgacgctggcgcgaatcggcaacgccgagtacgcg
cgcgagaacgcgtcgtacggactgacgacgctgcgcaagcgccacgtgacgatccgcccg
gggcaagtgcggctgcgtttcaccggcaagagcgggatcgaacacgacgtgaccgtcgag
gacccgcgcgtcggccgcatcgtgcggcgttgcgcggagttgccgggccacgagctcttt
cagtatctggacgacgacggtgcgcgtcattccgttggctcatccgacgtcaacgactac
ctgcgcgacgcagcgggcgcggagttcaccgcgaaggattaccggacgtgggccggcagc
gtgcaggcgctggcgctattgaggcggattccgcatcagggcgtcacgcacgcgcgcaag
cagatcgtcgaaacggtgcgggccgttgccgacatcctgcgcaacacgccggccgtatgc
cggcgctgctatatccatccgctggtgcttgaaacgttcgaggccggggaactcgatacg
ctcgaggtcgtccgcaagccgagggggctgcgcgcggatgaagcggcgttcgtggcgctg
ctggagcgggccgcgcggcgggagcggcggcgcgcgcgtcgatga
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