KEGG   Bifidobacterium choerinum: BcFMB_02580
Entry
BcFMB_02580       CDS       T05748                                 
Name
(GenBank) restriction endonuclease
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
bcho  Bifidobacterium choerinum
Brite
KEGG Orthology (KO) [BR:bcho00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bcho02048]
    BcFMB_02580
Enzymes [BR:bcho01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     BcFMB_02580
Prokaryotic defense system [BR:bcho02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   BcFMB_02580
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD PhoH DUF2113
Other DBs
NCBI-ProteinID: ATU19996
UniProt: A0A2D3D560
LinkDB
Position
complement(680997..684101)
AA seq 1034 aa
MTLTLKYSDDQQYQLDAIAATIDLFRDQRFSTSSFTVEEATSSAVYDAMQLELPVPGLTP
NAQQGALNLNESPTIGYANHVRISDLDLLHNLHAVQAANNLPPTEVRTDGRLRDFSIEME
TGTGKTYVYIRTIYELNKRYGLTKFIIVVPSVAIREGVRKTFETTRKHFKDLYDSQPLDY
FVYDAKNMGNVSSFATSASIEVMIINIGAFNKAFESDGDEDKSNIFHRVSEKLAGGRSPR
EMVAECNPIVIIDEPQSVDNTTKAKKAIESLNPLFVLRYSATLKESYNKIYELTPVDAFQ
QHLVKGICVDSVLAEENLNGAYVKLDSVKSEPSYSAKMTIDVLQKDGSQKRKTVTVKTGT
DLYEASKENPDYRDGWIVSNIDAEEGFESVTFSNDEYFEVGQVKGDVSVTLVKRAQIRRT
IENHFQKQVEMQPQGVKVLSLFFIDEVAKYREYLDAGDSGETMVENGEYARMFDEEYRKL
IASERWKRRFAKSGITIPEDPKTVRTGYFAQDRKTKRFKNSSGSAGTEADTDTFELIMRD
KETLLSLPDESNPSTLYSFIFSHSALKEGWDNPNVFQICTLVETRDTMTKRQKIGRGLRL
CVNQDGVRLHDPEANTLTVIANESYIDFANGLQKEFTKAGYRFGALAPESFTNLDMAQGA
AAVPQPLGFEKSRALYKYLESNKLINKQGKVLPELKQRVEQHTLELPEEFEAVRQGIEEI
ILQRAANLTIKNKQEEVTIEIRDEALYSDAFQELWQRIRQRSTYRLNVDEEKLIAESVEW
IQRMEEITPPKVRSVRADLNIDMAGVSTDDERESLMNMSDSLQYKLPDPISALQDIVGLT
RASLKRILEDSGRLDEYPIDPSAFITQVAYAISVAKTNVLAEGISYTLLPEDEWYTEQIL
IPHNRKGYLEQNAFQPSHIQKWLYDYVVYDSTTIEKPYALELDKVEQILVCTKLPPTFTI
DTPFGPYNPDWAYVREEDDGTKRLYLVVETKGGQKGQTNTRDPERAKIDCATAHFKQITA
EYPDFEYKPQSRFK
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgacgctgacactcaaatactccgatgaccagcaatatcagctcgatgccattgccgcc
acgattgacctgttccgcgaccagcgcttctccacttccagcttcactgtggaggaggca
acatcttcggcggtgtatgacgccatgcagcttgagctgccggtacccggtttgacgccc
aatgcccaacagggggcgctgaatctgaatgagtctccgacaatcgggtatgcgaaccat
gtgcgcatctccgacctcgacctgctgcacaatctgcatgccgtgcaagccgccaacaat
ctgccgccgacggaagtccgcacagacggccggttgcgtgatttctcgattgagatggag
accggcaccggcaagacctatgtgtacattcgcacgatctacgaactgaacaagcgctac
ggtctgacgaagttcatcattgtcgtgccctcagtcgccatcagggagggagttcggaag
accttcgagacaacccgtaagcatttcaaggacctgtatgacagccaacctcttgattac
ttcgtgtatgacgcgaaaaacatgggcaacgtgtccagtttcgccacatcggcatcgatt
gaggtgatgatcatcaatatcggcgccttcaacaaggcgtttgaatcggatggagacgaa
gacaaatccaatatattccatcgtgtgagcgaaaagctcgccggcggccgctcccctcgt
gaaatggtggcggagtgcaatccgatcgtcatcatcgacgagccgcaaagcgtagacaac
accaccaaagccaagaaggccatcgaatcgttgaatccgttgttcgtgctgcggtattcg
gccacgctcaaggagtcctacaacaagatctacgagctcacgccggtggacgcgttccag
cagcatctggtcaagggcatctgcgtcgactcggttctggcggaggaaaacctcaacggc
gcctatgtgaagttggacagcgtgaaatccgaaccttcatattcggcgaagatgaccatt
gacgtgctccaaaaagacggcagccaaaaacgcaaaaccgtcaccgtgaagaccggaacc
gacctgtatgaggccagcaaagaaaacccggattaccgcgatgggtggatcgtgagcaac
atcgacgcagaagagggcttcgaatccgtcacgttctcgaatgacgagtatttcgaggtg
gggcaggtcaaaggcgacgtctctgtgacgcttgtcaagcgtgcccagattcggcggacc
atcgaaaaccatttccagaagcaagtagagatgcagccccaaggcgtgaaggtgctctcg
ctgttcttcatcgacgaggtggcgaaataccgcgaataccttgacgccggcgatagtggc
gaaaccatggtcgaaaacggcgagtacgcgaggatgttcgacgaagagtatcgcaagctc
atcgcaagcgagagatggaagcgccgctttgcgaaaagcggcattacgatcccggaggat
ccaaaaacggtacgcaccggttacttcgcccaggaccgcaagaccaagcgcttcaagaac
tccagcggctcggcaggtacggaagcggataccgacaccttcgaactgatcatgcgcgac
aaggaaacgttgttgtcgttgccggatgaatcgaatccgagcacgctttattcgttcatc
ttcagccattccgcgctcaaggaaggctgggacaatcccaacgtgttccagatctgcaca
ttggtcgagaccagggacacgatgaccaagcgacagaaaatcggacgtggtctgcgtctg
tgcgtcaatcaggatggtgtgcgccttcacgaccccgaagccaatacgctcaccgtaatc
gccaacgaatcgtatatcgacttcgccaacggattgcagaaggaattcaccaaagcaggc
taccggtttggcgcccttgccccagaatccttcaccaatctcgacatggcacaaggtgca
gctgccgtaccccagcctctcgggtttgagaaatcgcgcgcactctacaaatatttggaa
tccaataagctcatcaacaagcagggcaaggttctgccggaactcaaacagcgtgtcgaa
cagcacacactcgagctccccgaagagttcgaagcggtccgccaaggcattgaagagatc
atcctgcagcgtgcggcgaatctcaccatcaagaacaaacaagaagaagtgaccatcgag
attcgtgatgaagcgctgtacagtgacgcgttccaagaactatggcaaaggatccgccaa
cgcagtacgtatcgcctcaacgtcgatgaggaaaaactgatcgctgaatcggtggaatgg
atacagcgtatggaggaaatcacgcctcccaaggtgcgaagtgtgcgagctgatttgaac
atcgacatggcaggcgtatctactgacgacgagcgtgagtcattgatgaacatgagtgac
tccctgcagtacaaactgcccgatccaatcagcgcattgcaggacattgttggactgact
cgcgcatcgttgaagcgcatcctggaagacagtgggcgtttggatgagtacccgattgac
cccagcgcattcatcacacaagtggcgtatgccatttccgtggccaagaccaacgtgttg
gctgagggaatctcctataccctgctgcctgaagatgaatggtataccgaacagatcctc
atcccccataaccgaaaagggtatctggaacagaacgcattccagcccagccatatacag
aagtggctttatgactatgtggtatacgattcaaccaccattgaaaaaccgtatgccctt
gagttggataaagtggaacaaattctggtctgcaccaagctgccgccgaccttcaccatc
gacacacctttcggaccatacaatcccgattgggcatatgtccgcgaagaggacgacggc
acgaagaggctctatcttgtagtcgaaaccaaaggtgggcagaaaggccaaaccaacaca
cgtgacccagaacgggcaaagatcgattgcgccaccgcgcacttcaagcaaatcacagca
gaataccccgattttgagtacaagccacagtctcggttcaagtag

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