Burkholderia cenocepacia J2315: BCAL0292
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Entry
BCAL0292 CDS
T00771
Name
(GenBank) 2',5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bcj
Burkholderia cenocepacia J2315
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcj03016
]
BCAL0292
Enzymes [BR:
bcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BCAL0292
Transfer RNA biogenesis [BR:
bcj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BCAL0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
CAR50602
UniProt:
B4E615
LinkDB
All DBs
Position
1:325889..326455
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AA seq
188 aa
AA seq
DB search
MNGDRLRAFVALMPDAASRDALHALPVTRGARRPPPAQLHMTLAFIGAIERERCDALAAH
LPALAAAHALPPMPVERIAWWPSLPRARLIVAELAVDAACVALNAGLAALLCELGVPADR
RPFRPHVTLARLPHDAVGQPAHGGAPGRPVDVRVEALTLFESRLSHEGVSHRPIVSVPIA
RADDSVGA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgaccggctccgtgcgttcgtcgcgctgatgcccgatgcggcatcgcgcgac
gcgctgcacgcgttgccggtcacccgtggcgcgcggcgcccgccgcccgcgcagctgcac
atgacgctcgcgttcatcggcgcaatcgagcgggaacggtgcgacgcgctggccgcgcac
ctgccggcgctcgcggccgcgcatgcgttgccgccgatgccggtcgagcggatcgcgtgg
tggccgagcctgccgcgcgcgaggctgatcgtcgcggaactcgcggtcgatgctgcgtgc
gtcgcgctgaatgcggggctggccgcgctgctgtgcgaactcggcgtgccggccgaccgc
cggccgttccggccgcacgtgacgctcgcgcggctgccgcacgatgcggtcggccagccc
gcgcacggcggcgcgccggggcggcccgtcgacgtgcgtgtcgaagcgctgacgctgttc
gaaagccggctgtcgcatgaaggcgtgtcgcatcggccgatcgtgtcggtgccgatcgcg
cgtgcggacgacagcgtcggcgcgtag
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