Burkholderia cenocepacia J2315: BCAL1585
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Entry
BCAL1585 CDS
T00771
Symbol
hupB
Name
(GenBank) histone-like DNA-binding phage protein
KO
K03530
DNA-binding protein HU-beta
Organism
bcj
Burkholderia cenocepacia J2315
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcj03032
]
BCAL1585 (hupB)
03036 Chromosome and associated proteins [BR:
bcj03036
]
BCAL1585 (hupB)
03400 DNA repair and recombination proteins [BR:
bcj03400
]
BCAL1585 (hupB)
DNA replication proteins [BR:
bcj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BCAL1585 (hupB)
Chromosome and associated proteins [BR:
bcj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BCAL1585 (hupB)
DNA repair and recombination proteins [BR:
bcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BCAL1585 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Urease_beta
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CAR51884
UniProt:
B4E881
LinkDB
All DBs
Position
1:complement(1750820..1751092)
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AA seq
90 aa
AA seq
DB search
MNKSQLIDAVAKNAELTKAQAAQSVEAVLNAIQLGLQEDGDVALSGFGTFAVAARKARTG
RNPATGESIQIAASKAVKFKPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcgcaactcatcgacgccgtggcgaagaacgccgagctgacgaaggcccag
gcggctcaatccgtcgaagccgtgctgaacgcgatccagctcggcctgcaggaagacggc
gacgtggcgctgtcgggcttcggcacctttgccgtggcagcgcgcaaagcacgcaccggc
cgcaatccggcgacgggcgaatcgatccagatcgccgccagcaaggccgtgaaattcaag
cccggcaaggcactgaaagacgccgtgaactga
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