KEGG   Bacillus cellulosilyticus: Bcell_3193Help
Entry
Bcell_3193        CDS       T01389                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bco  Bacillus cellulosilyticus
Pathway
bco03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Bcell_3193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bco03400]
    Bcell_3193
Enzymes [BR:bco01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Bcell_3193
DNA repair and recombination proteins [BR:bco03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Bcell_3193
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme CYTL1
Motif
Other DBs
NCBI-ProteinID: ADU31435
UniProt: E6U0J0
LinkDB All DBs
Position
3402845..3403789
Genome map
AA seq 314 aa AA seqDB search
MNIDFIKPFEPVQANIVPQGNEWIYEMKWDGVRIINYYNGDNVRLFNRKQNERTQQFPEL
LDIHSYCKASSVILDGEVIALGENGKPSFHQVMRRDALRNMDKVKQLIPILSVFYCIFDI
VYYNDEWVNDWHLSDRKDLLSEIITPNEFIQLTPSYDDGETLFDVTKQQGMEGIVAKKLS
STYAFGGKDNRWLKIKNFQDIIAVVGGVTYRNGIVNAILLGLYDNDMNLHYIGHAGTGKL
TQNDWRILTNFVDQLKIAQKPFVNEPERAKDAQWIKPSLTVKIKYIEWPKGRSIRQPSIQ
SFVDIPPTECLLPK
NT seq 945 nt NT seq  +upstreamnt  +downstreamnt
gtgaacatcgacttcattaaaccttttgaacctgttcaagcaaatatcgtgcctcaagga
aatgaatggatttatgaaatgaaatgggatggtgttaggattatcaattattataacggt
gataatgtccgtctttttaatcgaaagcaaaatgaacggacacaacagtttcctgaatta
ctagacattcactcatattgtaaggcaagttctgtcatattagatggtgaagtgatcgca
ctcggcgaaaatggaaaaccatccttccatcaagtgatgcggagagatgcacttcgcaat
atggataaagtaaagcaactaattccaatcttgtcagtattttattgtatatttgatatc
gtttattacaatgatgagtgggtaaacgattggcatttgtcagataggaaagatctttta
tcggaaattataacacctaatgagttcatacaattaaccccttcctacgatgatggtgaa
actctttttgatgtaacaaagcaacaaggtatggaaggaatcgtagcaaaaaagctaagt
agtacttatgcttttggaggtaaagataacaggtggctaaaaataaaaaacttccaggat
atcattgctgtagttggcggcgtcacataccgaaacgggattgttaatgccatattactt
ggcttatacgacaacgatatgaaccttcattatatcgggcatgctggcactggaaaacta
acacaaaatgattggagaatacttactaatttcgtagaccaattaaaaattgcacaaaaa
cctttcgttaatgagcctgaacgcgctaaggacgcacaatggataaagccgagcttaact
gtgaaaataaagtatatagaatggccaaaaggacgttccattcgacagcccagcattcaa
tcatttgtcgatataccaccaacggaatgtctcttaccaaaatga

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