KEGG   Baudoinia panamericana: BAUCODRAFT_63974Help
Entry
BAUCODRAFT_63974  CDS       T03106                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bcom  Baudoinia panamericana
Pathway
bcom03030  DNA replication
bcom03410  Base excision repair
bcom03420  Nucleotide excision repair
bcom03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BAUCODRAFT_63974
   03410 Base excision repair
    BAUCODRAFT_63974
   03420 Nucleotide excision repair
    BAUCODRAFT_63974
   03430 Mismatch repair
    BAUCODRAFT_63974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcom03032]
    BAUCODRAFT_63974
   03400 DNA repair and recombination proteins [BR:bcom03400]
    BAUCODRAFT_63974
Enzymes [BR:bcom01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BAUCODRAFT_63974
    6.5.1.6  DNA ligase (ATP or NAD+)
     BAUCODRAFT_63974
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BAUCODRAFT_63974
DNA replication proteins [BR:bcom03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BAUCODRAFT_63974
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BAUCODRAFT_63974
DNA repair and recombination proteins [BR:bcom03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BAUCODRAFT_63974
   NER (nucleotide excision repair)
    Other NER factors
     BAUCODRAFT_63974
   MMR (mismatch excision repair)
    Other MMR factors
     BAUCODRAFT_63974
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 19116120
NCBI-ProteinID: XP_007672504
JGI: Bauco1_63974
UniProt: M2N7E6
LinkDB All DBs
Position
Unknown
AA seq 882 aa AA seqDB search
MSTPNKRRKKNDYHSSPQPVRSLDFFFAKQKEKRNEEAEAAITTQDPNGIANGNGDVGVG
VDEELTDEQLARKLQAQWDEQDRLPLADGRNDGPVANGDSHLDPEKQPPDKEEEEQAVDV
APKHEETVDNIEDKPASNAFSALGGKKSTLSLQSATAEEDNTTYNVPFDQSPLTFDPQTH
LTELKKHTQSRIKIVDTLVNLLRTIIEGDPESLLPAVWLATNSIAPPYIDIELGLGGSAI
SKALKKVCGLDNAALKTLYNRHGDAGDVAFEAKKRQSLTLRKPKPLTIKGVYEALHKIAN
AKGHGSVEVKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFLLSRP
PDADFPIKPTAELGKLSKQNLAEAYSPGEELVKASFARRPNYNDLVPTLLSVGISDELLV
RCGLAMHIPLRPMLGGITRDMGEMLTRLQGRDFSCEFKYDGQRAQVHCDAAGKVTIFSRH
LEVMTEKYPDLVALVPQIRGEGVSSFIMEGEVVAVDRASGELKPFQVLANRARKDVVIQS
VKVDVCLFAFDLMYLNGEELLNRSFRERRNLLRSLFVEILNHFTWVRSMDATSADGEAVS
DFFKQATDIKCEGIMVKVLDNLVNPALAADMDVDGNDELPTPAKPPPTPSKPSKKKSGAK
AKPTGEDASTEEKKGGRRKALLATYEPDKRLDSWLKVKKDYDTSAADTIDLIPVGGWHGQ
GRKNAWWSPILLACRNEETGTLEVVTKCISGFTDAFYKANKEKYSEDGEHGNVIARPSYV
EYAGEPDVWFEPQEVWEMAFADVTLSPTYTAARGLVSEERGLSLRFPRFLKVREDKGIEE
ASTNEFLAGLYRKQMVRVEEGGGGGGGGGMGQVQEAEEEEEE
NT seq 2649 nt NT seq  +upstreamnt  +downstreamnt
atgagcacgccgaacaagcggcgcaagaagaatgactatcactcctcaccgcagccggtg
cgaagcctcgacttcttcttcgcgaagcagaaggagaagcgcaacgaggaggcggaagct
gccattaccacccaggacccgaacggtatcgcaaatgggaatggggatgttggggtgggg
gtggatgaagagttgaccgacgagcaattggcacgaaagctacaggcgcagtgggacgag
caagaccggctaccactagcggatggacgcaacgacggaccggtagcgaacggggattcg
catcttgatccagagaagcagccgccagacaaggaagaagaggagcaggccgtggacgtg
gcgccgaagcacgaggagactgtcgataacatcgaagacaagcccgcaagcaatgccttc
tctgctctgggtgggaagaagtccaccctctcccttcaatcagccacggccgaagaggac
aacacgacgtataacgtgcccttcgatcagtcacccctcacgtttgacccgcagacgcat
cttaccgaactgaagaagcacacacaatcacgtatcaagattgttgacaccctcgtgaat
ctgctccggactatcattgaaggcgacccggagtcactacttcccgctgtgtggctggcc
accaactccatagctccgccgtacattgacattgaactcggccttggcggctcagcaatc
tccaaagcgctgaagaaagtgtgcggtcttgacaatgccgcgctcaaaacactgtacaac
cgacacggtgatgcaggagacgtcgccttcgaagcgaagaagcggcaatcgcttaccctc
cgtaagccaaaaccgttgaccatcaagggagtctacgaagccctgcacaagatcgcaaat
gccaaaggccacggcagtgtagaagtgaagcaacgcattgtcgagcgcctagtgcaggac
gctcgcggtgcagaagagagccgctacatcgtgcgcacccttgtccaacacctccgcatt
ggcgcggtaaagacgacaatgctcatcgcgctctcccgagctttcctcctatcccgccca
ccagatgcagacttccccatcaagcccaccgccgagctcggcaaactcagcaagcagaac
ctcgcggaagcctactcgcccggcgaagagctcgtcaaagcctcctttgcccgccggccg
aactacaacgacctcgtgcctactttattgtccgttggcatcagcgacgaactgctcgtc
cgttgtggtctggccatgcatattcctctgcgacccatgcttggcggaatcacgagagac
atgggcgagatgctcacgagacttcaaggccgagacttcagctgcgaattcaagtatgac
gggcaacgagcgcaggtgcattgcgatgcggcgggtaaggtcacaatcttctcccgccat
ctcgaggtgatgacggagaagtacccggatcttgtcgccttagtcccgcagatccgcggt
gagggcgtcagcagcttcatcatggagggcgaagtcgtcgccgtcgatcgcgcgtcaggg
gaactgaagccgtttcaagtattggccaacagagcgaggaaggatgttgtcatacaaagt
gtaaaagtggacgtttgtctcttcgcttttgatctgatgtacctcaacggggaagagcta
ctcaaccgcagttttcgcgagagaagaaatctcctgcggagtctgttcgtggagattctg
aatcactttacctgggttaggagtatggacgccacgtccgcggacggagaggctgtgagc
gacttcttcaagcaagcgaccgatatcaaatgcgagggcatcatggtgaaggtgttggac
aatctcgtcaaccccgctctggccgcggacatggacgtggacggcaacgacgagctgccc
actcccgccaaaccgcctcccacgccctccaaacccagcaagaagaagagcggcgccaaa
gcgaaacccaccggcgaagatgcaagcacggaagaaaagaagggcggccgccgcaaagcc
ctcctcgccacctacgaacccgacaaacgtctcgactcctggctgaaggtgaaaaaggac
tacgacaccagcgcggcggacaccatcgacctgatccccgtcggcggctggcacgggcaa
gggcggaagaacgcgtggtggtcgcccatcctgctcgcctgccgcaacgaagaaaccggc
acgcttgaggtggtgacgaaatgcatctccggcttcacggacgcgttctacaaggcgaac
aaggagaagtattccgaggatggggagcatggcaatgtgatcgcccggccgagctatgtg
gagtacgcgggggagccggatgtgtggtttgagccgcaggaggtgtgggagatggcgttt
gcggatgtgacgttgagtccgacgtatacggcggcgagggggttggtgagtgaggagcgg
gggttgagtctgaggtttccgcggtttctgaaggtgagggaggataaggggattgaggag
gcgtcgacgaatgagttcttggctggtctgtaccggaagcagatggtgagggttgaggag
ggtggtggtggtggtggtgggggtgggatggggcaggtgcaggaggcggaggaagaggag
gaggagtag

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